Poeciliopsis prolifica (blackstripe livebearer): 129375866
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Entry
129375866 CDS
T09758
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03320
PPAR signaling pathway
pprl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129375866 (rxrba)
03320 PPAR signaling pathway
129375866 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129375866 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprl03310
]
129375866 (rxrba)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129375866 (rxrba)
Nuclear receptors [BR:
pprl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129375866 (rxrba)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
129375866
NCBI-ProteinID:
XP_054911206
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MGDSRDSCSPDSSSVSSPPSGQRSPPLVPSAASMTSLPPITTTGVNSPISSIGSPFSVIS
SSLDSPCLPGTPSVGYGPISSPQINSTVTMSGLHAVSSSDDVKPPLGLKQLSAHSPGPML
SQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQY
CRYQKCLAMGMKREVAKMNDRSVQEERQRNKEREGEVESTSAVNEEMPVEKILEAEMAVE
QKTELHADGSSDGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRANNAEVGALFDRVLTEL
VSKMRDMQMDKSELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLEAYCKQKYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagattcttgcagtccagacagttcgtctgtgtcttcccctccctcg
ggccagcgctccccgccgctggttccctcagcagcttccatgacttcactgccacccatc
accaccacaggggtcaacagccccatcagtagtattggttcacccttttctgttattagc
tcatcactggactcaccctgcctacctggcacaccttcagtgggatatggcccaattagc
agcccccagattaactcaacagtgaccatgtcagggctccatgcagtgagcagctccgat
gatgtgaaacctcctcttggcttgaagcagctgtctgcccacagcccagggccgatgctt
tcccagaaacgcctttgttccatctgtggagacagatcttctggtaagcactatggcgtc
tacagctgtgagggctgtaaaggcttcttcaagagaacagtgcgaaaagaccttacctac
acctgtcgggacaataaagactgcacagttgataaaagacagaggaaccgctgccagtac
tgccgctatcagaaatgcctggcgatgggaatgaagagagaagtggccaagatgaacgac
agatctgtgcaggaggagcggcagagaaacaaggagcgcgaaggtgaggtggagtcgacc
agcgcagtgaacgaggagatgccggtggagaagattttggaagctgagatggctgtcgag
caaaagacggagcttcatgcagatggaagttcagacggaagctctcccaacgatccggtt
accaacatctgtcaggcagcagacaagcagctcttcactctggtggagtgggccaagagg
atccctcacttctctgagcttcctctggatgaccaggtcatcttgctccgcgcaggctgg
aatgagctcctgattgcgtccttctcccatcgctccatctcggtgaaggacggcatttta
ctggccactggcctgcatgtccacaggaacagcgcccacagcgcaggggtcggagccata
ttcgacagggcgaacaatgctgaggttggggccctatttgacagggttctgacagagctt
gtaagcaaaatgagagatatgcagatggacaagtcagagctgggctgccttcgagctatc
atcctctttaacccagatgccaagggtttgtccaatcccagtgaggtggagcttctgcga
gaaagagtttatgcatcacttgaagcgtactgcaaacaaaaataccctgaccagcagggc
aggtttgccaagctcctcctccgactcccagcactgcgctccatcggtctaaagtgcttg
gagcatcttttcttcttcaaactgattggtgacacgcccattgacacctttctgatggag
atgctcgaggcgcctcaccagctgacttaa
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