Poeciliopsis prolifica (blackstripe livebearer): 129376293
Help
Entry
129376293 CDS
T09758
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129376293 (trim71)
04121 Ubiquitin system [BR:
pprl04121
]
129376293 (trim71)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129376293 (trim71)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129376293 (trim71)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129376293 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
129376293
NCBI-ProteinID:
XP_054911853
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSGSSNHATKRLHVLPCLHTFCR
QCLEGQRSPSDPLKLRCPTCDHKVSISEAGVDSLPSSNFLFSNLLDVVVSAEDQIQNKNG
HHHLGGLIGGSSGFHPSHGGLLHAQHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIERLGESLHLSRVNSNSSGTGQPGMSVSLAQSLQNNFALLSLFQDRMSFC
QHHDSEVFLFFCETCSMPICRECSVGRHMGHTFVYLQDAMQECRAITIQLLTDAQQGRQA
VQQSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLY
LQVEKLHQSLTKLDSTIAAVSQMLDEGHHLDVLLARERMLTQLQEIKSVRGLLLPQEDDR
FMFTPPDQALYIAIQSMGLISSSAFAPVTKAHGEGLKNVLRGKPSSFTVIGYDHDGEPRL
SGGDPVSAMVMSVADGSQSPVEVTDHQNGSYTVSYLPKTEGEHLVSVLVCNQHIQGSPFQ
VTVKSGRSYVSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHR
IQVFEPNGNFLCKFGTQGSGYGQMDRPSGVAVMPDGVIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttccccgattctgacctgcagacctgtccgctctgcaaggagctgtgcggc
tcctccgctcccatctcctccagctcctctacctcgtcctcctcttcgcacacctctggc
tcctccaaccatgccaccaagaggctccacgtcctgccttgcctgcacaccttctgcagg
cagtgtttggagggacagcgcagccccagtgacccgctgaagctgcgttgccccacctgc
gaccacaaggtctccatctctgaggccggagtggactccctgccctcctccaacttcctc
ttcagcaacctgttggacgtggtggtgagcgcggaagatcagatccagaataagaacggt
caccatcacctcgggggcctgatcgggggctcgtccgggttccacccgtcccacgggggc
ctgctgcacgcgcagcacctgggggagcctcagtgtagctcctgcgacgaggagaacccg
gcaacgtcccactgcctcgactgccaggagtacctctgtgacaactgcgtgcgagctcac
cagcgggtgcggctgaccaaagaccacttcatcgagcgcctgggggagagcctccacctg
agccgggtcaactccaacagcagcggcacgggccagccggggatgtccgtgtccctcgcc
cagtccttgcagaacaactttgcgctgctgtccctgttccaggaccggatgagcttctgc
cagcaccatgacagcgaggtattcctgttcttctgcgagacctgctcgatgccaatctgc
agggagtgcagcgtgggccgtcacatgggccacaccttcgtctacctgcaggacgccatg
caggagtgcagggccatcaccatccagctgctgacagacgctcagcagggacgacaggcc
gtccagcaaagcatggaaaaagtgcaagccatggcggagcaggtggagatcaaggccaag
gtggtgcagaccgaagtgaaggctctggttctgagacacaagaaagctctggaggagagg
gagtgtgagctcctgtggaaggtggagaagattcgtcaggtgaaggccaagtctctgtac
ctgcaggtggagaaactccaccagagtctcaccaagctggatagtaccattgctgccgtg
agccagatgctggatgagggccaccacctggacgtgctgctggccagggagagaatgctg
acccagctccaggaaatcaagagtgtcagggggctgctgctgccgcaagaggacgaccgc
ttcatgttcacacctccagaccaggctctgtacatagccatccaatccatgggcctgatc
agcagcagcgcctttgcccccgtcaccaaagcccacggcgaaggtctgaaaaacgtactg
cgcgggaaaccctcatccttcacagtcattggatacgatcacgacggcgagccgcgcttg
tccggcggcgacccggtgtcggcgatggtgatgtctgtcgcagacggctctcagtccccg
gtggaggtgacggatcaccagaatggatcctacaccgtcagttacctgccaaaaacggag
ggagagcacctggtgtctgtgttggtgtgcaaccagcacatccagggcagccccttccag
gtgacagtcaagtccggacggagctacgtgtccctcggatcccaggtgtcgtctttcgga
tgtgagggggagggggacggacaactgtgtcgcccctggggcatcagcgtggacaaggaa
ggatatgttgtggtggcggatcgcagcaacaaccgcatacagatcttcaagccttgtggt
gccttccaccataaattcggctccttgggttctcggcctggtcagtttgatcgtccagcc
ggggtcgcctgtgacagtcagagacggatcattgttgctgataaggacaatcaccgtgtt
caggtgtttacgtttgagggccagttcctgctgaagtttggggaaaaaggcaccaagaac
gggcagttcaactatccctgggacgtggccgtcaactctgagggtaaaatcttggtctcg
gacaccagaaaccaccgcgtgcagctctttgcccccgacggttccttcctcaacaagtac
ggcttcgaaggggctctgtggaaacactttgactcccccagaggggtcgccttcaaccac
gaagaccacctcgtcgtgaccgacttcaacaaccaccggctcctggtcatccggccagac
tgccagtcggctcgcttcttgggctcggagggcacggggaacgggcagtttctgcgcccc
cagggcgtcgccgtggaccaagagaaccgcatcatcgtggccgactcccgcaaccacagg
atccaagtgtttgagcccaacggaaactttttatgcaaatttggcactcaggggagtggc
tacggacagatggaccgcccctccggggtagccgtgatgcccgacggagtcatcgttgtc
gttgactttggaaacaaccgcattctcaagttctaa
DBGET
integrated database retrieval system
