Poeciliopsis prolifica (blackstripe livebearer): 129376367
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Entry
129376367 CDS
T09758
Symbol
khdrbs1b
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1b isoform X1
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129376367 (khdrbs1b)
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129376367 (khdrbs1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
STAR_dimer
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
129376367
NCBI-ProteinID:
XP_054911962
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MENDDKYLPELLAEKDSLDSSFTHAMKLLNSEIDRVQKGEPKKETETYLDLFTTKNIKLK
ERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGE
PKYAHLSMELHVFIEVFAPVPDAYLRMAHAMEEVKKFLFPDMMDDICQGQFMEMSYLNGG
QEHGGRGRGGMPVRGRGVPPAGAHRGRGMPPHGAAARGGVTRGGPARGGAVRGAPAGRGG
PPAAPARGAVAPRARPPAGGPPQRMAPPPAHQHTAGAGAENYDEYCYDENYTDTAYESYD
SYYSQPQAEPEYYDYGHGETTELYESYEHEEMWPSLCAQDDWNGTQRTAAGKAPPPSRGG
STAYREHPYRQY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgacgataaatatctccccgaactgctggcggaaaaggacagcttggactcg
tcgttcacgcacgccatgaaacttttaaactcagaaatcgatagagtgcagaaaggagag
ccgaagaaggagacggagacctacctggaccttttcacaacaaagaacatcaaactcaag
gagcgagtgctcattcctgtcaaacagtacccaaagttcaatttcgtggggaagatcctg
ggaccgcagggcaacacgatcaagcgtctgcaggaagagaccggcgccaagatctctgtg
ctgggcaaggggtccatgagagacaaagccaaggaggaggaattgaggaaaggtggcgag
cccaagtacgcccacctgtccatggagctgcatgtcttcattgaggtgttcgcccccgtg
ccggacgcttacctgcgcatggcgcacgccatggaggaggtgaagaagttcctgtttcct
gatatgatggatgatatctgccagggccagttcatggagatgagctacctgaatgggggc
caggagcacggaggcagaggcagagggggcatgcctgtcaggggccgtggtgtcccccct
gctggagcacacaggggcagggggatgcctcctcacggtgctgcagccagaggaggtgtg
actagaggaggcccagccaggggcggagcagtgaggggcgcccccgcaggcagaggagga
cctcccgctgcccccgccagaggggctgtggcaccacgcgccagacccccggctggcggc
ccgcctcagaggatggcaccgccccctgcacaccagcacacggccggcgccggcgcagag
aactatgacgaatactgttacgacgagaactacacagacacagcctacgagtcttacgac
agctattacagccagccgcaagcagaaccagaatattacgactacggacacggagagacg
accgagttgtacgagtcatacgaacatgaggaaatgtggccaagcctctgtgcccaggac
gactggaacggcacccagcggacggctgcagggaaagcgcctcccccctctagaggcggc
agcacggcttaccgggagcacccctaccgacagtactga
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