Poeciliopsis prolifica (blackstripe livebearer): 129376857
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Entry
129376857 CDS
T09758
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129376857
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
129376857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
129376857
NCBI-ProteinID:
XP_054912439
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MAGPEPSHPEPACLEAQKWIEAVTGKNFGDKGFRSALENGILLCELLSAIKPGLVKKINR
LPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSIRANLKDSDCNRKLKNVLNTVF
WLGKAASGCPSYSGPNLNLKEFEGLLSQMKLESDDGGDSSQKRSVRDSGYDCWDSERSES
LSPPQHTRDNSLDSLDSFGSRSQHSPSPDVVKRGNSDGRGSDSEADAPSRKPDVRKDDML
ARRTASSDSRCPVPFNQFLPNRANANCYIPTPRRKHPEEGEQRSHLQTIPEQTKRTGFQQ
KPPKTVTWAPESQAEKLKQGEDLEVLEQRRLEKLKKAGIKVLPAAVRYNSTAITEEKEAR
SPSPNIILRSENEFLSSNSPACDSSSDSEQDVETRRVPDVQRDDLASRRVHRSPGNSRVH
QFVPPPICTTRDRERWEGIRRASQQTLQQTEISDKEAVCDIITRKDNPSLKQEEDEGEEG
KDKTMPNKQRDDLAHRRGQSRPLPQRDGPMSFVSSSMSPSDVEKWERLRMTEPSEDRPAP
VCQACLQKTYGLRGSAKAGRRHGRVVTFGGLTEIEQPTEAVTSGGEEPELLRRLQSKATV
AMTTADLGFRLSEGDRSFVIDGCAASPPAAEHRPWTAGSTPTAAEIDARFALYKQRAQAE
DEEEEEEERIPDLQKDDMMARRTGAFLKQTAGSADFRRFLPPPRSGRSRRGEVAADAVPP
SNKEVLIGTRAASQQPRIPEESPHNSLKPAVIRATTQTEGEPDESDRDNNIPDLDRDDMV
ARRNGTFQKAAIFRGNQGFNQFLPVPGSVRRNISSETAVKQSCNRSKLSTGMNGGSSCVA
MAAELEAPPFKAPSSPTCPGLAGRQVPDAALIDAIEPSSSSSSSLIHPPSLPSAHTRRVE
EQVEVGREEEKSEDGKMRREKKPCWLEDELPPMMVSRRVAFLLDNESVSMGDMANEDEAG
HFPSLSPSRYERMHQQYNAFVEEEDHWQDDLARWKNRRRSASQELIKKEEERKRMEKRMK
GNEVDGNKRKSIKTYKEIVEEKERREAELCEAYRQAATPEEAALVLQRYALRFTISDATL
DSLKLPRSTNKSNQFLNQTEQEHSQTSGTDDSGRLEHPDQQDIDGLTEQEHCGQTEDSHE
KHQSGVNLSSSSAPDVLQLKDTNSHSEKLQSEHLPEPPSPLTDLRDENKNQPDPGAPQSP
TQPAVAPQLKHKLPSLPSAPSRPLPLLAAKPYCPPRCSPPEHKHVEVQQLDGLVRLNGET
AEDFASLPNPLQENPAVSSQHMQEPDPPEDSAEQPEPPLTERPAATSGSAISSLIAGRNC
IITTTIVTELTKTQVEPLHPDVQDDAQDGATETPVEKGDPQLVQSPSSLPEYSPSVSEGL
EESSVTIETPMLNLAKRVNHWVWDPNEERKRLESWQQEQERLLQEQYQKEQEKLKKEWEK
AQLEVEEEERKHNEEERRILEETVAPLSPSASVQRQLERTAAAPFSAEENNNAAVRGNVS
LQQNGQKIHTGSEDQHASKLHFFQDTGCDEQLPQKQEMWKTSSLDRSPQTNQTQNVKRSG
SHDAVAGNQDDAVAGNPSAPQPASPSRCVSGKRLCSGCSKPLGRGAAMIIDTLGLFFHMQ
CFKCGVCKGQLGDATAGTDVRIRNGLLSCYECYIASRGRGQPTPL
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggccggtccggagccgagccatcccgagccagcctgcctggaggcgcagaaatggatc
gaggctgtaacagggaagaactttggagacaaaggcttccgcagtgcgctagagaacggc
atcctgttatgcgagctgctgagtgcaatcaaacccgggctggtgaagaagatcaacaga
ctgcctacccccatcgccgggctggacaacctgtccgtcttcctccggggctgtgaggag
ttgggcttgaagggctcccagctgtttgacccgggggacttacaggatacttccatacgt
gctaatctcaaggactctgactgcaaccgcaaacttaaaaatgtgctgaacacggttttc
tggcttggaaaagctgccagcgggtgtccttcctacagcggtcctaatctgaacctgaaa
gagtttgaagggctgctgtctcaaatgaagctggaaagcgatgatggcggcgacagctct
cagaagcgcagcgttcgagacagcggctacgactgctgggactcggagaggagcgagtct
ctctctccgcctcaacacactcgggacaactctcttgacagtctggattcctttggttcc
cggtcgcagcacagtccctctcctgatgttgtgaaacgaggcaacagtgatggacgcggc
agcgactcggaggctgacgctcccagcagaaaacccgacgtacggaaagacgacatgttg
gccagaagaacagccagcagcgactccagatgcccggttcccttcaaccagtttcttcca
aaccgagccaacgccaactgctacatcccgaccccacgacgaaaacacccagaggaagga
gagcagcggagtcaccttcaaaccattccagaacaaaccaaacgaactggatttcagcag
aaaccccccaaaacggtgacttgggcacctgaaagccaggccgaaaaactgaaacaggga
gaggacttggaggttttggagcagaggaggctggagaagttgaagaaggcaggaattaag
gttctgcctgctgctgttcgctacaacagcactgcaataacggaggaaaaagaagcaagg
tcaccatctccgaacatcattcttcgctctgaaaatgaatttttgagctccaacagtccg
gcttgcgattcctcctccgacagcgagcaggacgtggagacaaggagggtccccgatgtc
cagagagacgatttggcatcccgacgagtccaccggagcccgggtaactccagagtccat
cagttcgtccctccacccatctgcaccaccagagacagagagcgctgggagggcatcagg
cgagcctcacagcagaccctgcagcagacggagatcagcgacaaggaagcagtctgtgac
atcataacccgtaaagacaacccctccctaaagcaagaagaggatgagggggaagaggga
aaagataagacgatgccaaataagcagagagatgacctggctcataggcggggccaaagc
agacccctccctcagagggacggaccaatgagctttgtttcctcctccatgagtccgtct
gatgtagagaagtgggagaggctcaggatgactgaaccaagtgaggataggccagccccc
gtgtgtcaggcttgtctgcagaaaacttacggactcagaggatcagcaaaggctggacga
cgtcatggcagggttgtgacctttgggggtctgactgagatcgagcagccgacagaggca
gtcacttcgggaggggaggagccagagttgcttagacgactccagtccaaagcaacggta
gccatgactaccgctgacctgggcttccggctttcagagggggatcgcagttttgtcata
gacggatgtgcagcctcccctcccgctgcggaacaccgaccctggaccgccggatccacc
cctacagccgctgagatagacgctcgttttgctctgtacaagcagagagcacaggcagaa
gacgaagaagaggaggaagaggagcggatccccgaccttcagaaggacgacatgatggcc
aggaggacaggtgctttcctaaaacaaacagctggctcagcagatttcaggcgtttcctt
cctccgcccaggtctgggcggagcagacgaggggaagttgctgctgatgctgtgcctcct
agcaacaaggaagtgctcattggcaccagagcggccagccagcagcccagaatcccagaa
gaatcgcctcacaactcactgaagcctgcagtgatcagagcaacgacccaaactgaaggc
gaacccgatgagtccgatagagacaacaacatccccgatctggacagagatgacatggtg
gctcggaggaatgggacattccagaaagcagccatcttcagaggaaatcagggcttcaat
cagttcctgccagtccctgggtcagtcagacgcaacatcagttcagagactgcagtaaag
cagtcatgcaacaggtccaaactcagcacaggcatgaacggaggaagcagctgtgttgcc
atggcagcggaacttgaagcgccgcctttcaaagccccgtccagcccgacgtgtcctggg
ctggcggggaggcaggtccctgatgcagctcttatcgatgcgatcgaaccgtcctcttcc
tcctcctcctcactcatacatcctcccagtcttccctcggctcacacccggagggtggag
gagcaggtggaggtggggagagaggaggagaaaagcgaggatgggaagatgaggcgggaa
aagaaaccatgctggctggaggatgagcttcctccaatgatggtgagccgacgagtggct
tttctcttagacaatgagagtgtcagtatgggagacatggccaacgaagacgaggcagga
cacttcccttcgctgagcccgtcgcgatatgaacgcatgcaccagcagtacaacgctttc
gtggaagaggaggaccactggcaggatgacctggcccgctggaagaaccgccgccgcagc
gcatcacaggagctgattaaaaaggaggaggagagaaagaggatggagaagaggatgaag
gggaacgaagtggacggcaataaaaggaagagcattaagacttacaaggagatcgtggag
gagaaagaacgcagggaagctgagttgtgtgaagcatacagacaggcagcgactccagag
gaggcagctttggttttacagcgctatgccctccgtttcaccatcagcgatgcaacactg
gacagcctgaagctgcccagaagcactaacaaatctaaccagttcctgaaccagacagag
caggagcacagccagacgtcaggcaccgatgactcagggaggctggagcatccagaccag
caggacatagacggtctcaccgaacaggaacactgtggacagacagaggacagtcatgaa
aaacatcagtctggtgtgaacctcagcagctcttctgcaccagatgttcttcaactcaaa
gacacaaactcacacagtgagaagctccagtcggagcaccttcctgagcccccgtccccc
ctgacagaccttcgtgatgagaataagaatcagccagacccaggagccccccagtccccc
actcaacctgctgttgcacctcaactcaaacacaaactcccctcccttccatctgcaccc
tccagaccgctccccctgctggcggccaaaccctactgcccacccaggtgttctcctcct
gaacacaaacatgtggaggtgcaacagctggacggtttggtccggctgaacggagaaacg
gctgaggactttgcttcccttccgaatccgctacaggaaaacccagctgtttcctcccag
cacatgcaggaaccggatcccccagaggatagcgcagagcagccggaacctccactgacc
gaaaggccagccgcgacttcaggctccgccatcagctccctgatcgcaggccgaaactgc
atcatcaccaccaccatcgtgacagaacttacaaagacccaggtggagccgctccacccg
gacgtccaggatgacgctcaggatggagccactgagacgccagtagagaaaggggatcct
cagcttgtccaatcacccagcagtttaccagaatactctcccagtgtctctgagggactg
gaggagagcagtgtgactattgagacccccatgttgaacttggctaaacgtgttaatcac
tgggtctgggaccccaatgaggagcgtaagcgcttggaaagctggcagcaggagcaggag
cgcctcctacaggaacaataccagaaagaacaagagaagctgaagaaagagtgggagaag
gcccagctggaggtggaggaggaggagaggaagcacaatgaagaggaaagacgaatttta
gaagagaccgtagcccctctcagtccctcggcctcagtgcagaggcagctggagcgcacg
gccgcagcgccattttctgccgaggaaaacaacaacgccgcagtcagaggaaacgtgtct
ctgcagcagaacggacagaaaatccacacaggaagtgaggaccagcacgcatcgaagctt
cattttttccaggatactggatgtgatgaacagctgccacagaagcaggaaatgtggaag
acgtcatctctggaccgcagccctcagaccaaccagacgcaaaatgtcaaaagatcagga
tcacatgatgctgtagcaggtaaccaggatgacgctgtagcaggtaacccttcagcacct
cagcctgcgtctcccagcaggtgtgtcagtgggaagcgactttgttcgggctgctccaaa
cctctgggaagaggagctgctatgatcattgatactctgggcctgtttttccacatgcag
tgttttaagtgtggcgtatgcaaagggcaactgggtgacgcaacagcagggaccgacgtc
aggattcggaacggactgctgagctgttatgagtgctacattgcatcccgaggcagaggt
cagcccactcctctttaa
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