Poeciliopsis prolifica (blackstripe livebearer): 129376892
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Entry
129376892 CDS
T09758
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129376892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprl03009
]
129376892
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
Pre-60S particles
RNases
129376892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
129376892
NCBI-ProteinID:
XP_054912517
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MECSSSPNVLSGKKKRQNEAPSAQEDVKRRKTEEEGYEDLQSRAGSSAKVSVRLDRLQQP
ITVAQLMELLHFAALGKSRGIKQPSWCRLHHQRKISRINVAIVDGVTQSLFYNHYLSMVH
LRSIYSTRITFTPSDDVASDIFSLEVPEVDFLSLSASEEALHEALRNHPVITMFGTQRRG
LTAYMLSQQQMIKNHYPVKGLPGFEDFMCTDSNVCASDDSPLYGLDCEMCQTMKGNELAR
VSLVDSNGNCLLDELVKPQNLVINYLTKFSGITAAMLRPITTTLRDVQAKIRTLLPDNAV
LVGHSLNNDLKALKLIHPHVIDTALLYRKEHGQKFKLKVLAEVVLKRRIQTEDQRGHNPT
EDALAALDLARYFIRTGPLQVVELHLEDLWGWSLEESPNYTPDPTPSYRFADILQSLSRP
VAFLGKRSYVDLDLSRQRWYRSDKEMLFCFRNQTSHLFLSVLRFSSFSNHLKENYVHRLH
QQQLYHNVSAVLRDMCTVFAGPFPANFSKREVKRLFGCCGPVHKVQMWNTGVRIHAKVEF
QMLEGATLALEVLNGFSVSGQIIKVQRPVKESMLDLDLNLDALMCDRVNSNQLYVSRLTQ
DVAEGLNVSATVNGRLPGWKPDGYHPGRQTNGLLQTSKVNGKQLHPWTTAPDLSEESLRE
TFSPFGSIKSVTLPRIHARHACIEFESSDSKHAALGSSQDLLKNGYPTWPSITPPHLHSW
VGMATSRKTQDEEEEAMDEQRADSFNYDGTQRNQEVSLLNKLDRRLSRVFNSLPDGTLSV
VLLLGHNSRGCDHPGLCFLEVKNGF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggagtgctcctcatctccaaacgtcctgagcggcaaaaagaaaagacaaaatgaagct
ccgtctgcacaggaggacgtcaaaagaaggaagactgaagaggaaggctatgaagacctc
cagagtcgagctggcagttcagcgaaggtgtcggtgcgtctcgaccgcttgcagcagccg
atcaccgtggctcagctgatggagctgcttcattttgctgctctggggaaatccaggggt
atcaaacaaccgagttggtgtcgtctccaccatcagaggaagatcagccgtataaatgtt
gcaatcgtggacggtgtgacgcagagtctcttctacaaccactacctttcgatggtgcat
ctccggagcatctactccaccagaattacattcactccatctgacgatgtggcatctgac
atcttcagccttgaagttcctgaggtggattttttatctctttctgcatcagaggaggcg
cttcatgaagccctgaggaatcacccagttatcactatgtttggcactcagaggagggga
ctgactgcatatatgctgagccaacagcagatgataaaaaatcactatccagtcaaggga
cttccaggtttcgaggactttatgtgcacagacagcaatgtctgtgcaagtgatgacagc
ccgctgtatggactagactgtgaaatgtgtcagacaatgaaaggaaacgagctggctcgt
gtttctctggtggacagcaatgggaactgcttactggatgagctggtgaaacctcaaaac
cttgtcatcaattacctaacgaagttctcaggcatcactgcagccatgttaagaccgatc
accaccacgctgcgggacgttcaggcaaagatcaggacactgttaccggataatgccgtt
ctagtgggccactccctcaacaatgacctcaaagcactcaaactcatccaccctcacgtg
atcgacaccgccctgctgtacaggaaagaacacggacagaagtttaaactgaaggttctg
gccgaggtggtgctgaagaggcggatccaaaccgaggaccagaggggtcacaatcccacc
gaggacgccttggcagcgctggatctggcccggtacttcatcagaacggggccgctccag
gttgtggagcttcacctggaggacctgtgggggtggagcttagaagagtcccccaactac
acaccggaccccacaccaagttacaggtttgcagacattttgcagagcctcagccgcccc
gtcgcatttctgggaaagcgctcctacgttgatctggacctgtcccgtcagcgctggtac
agatctgacaaagagatgctcttctgcttcaggaaccagacgagtcacttgttcctgtct
gtccttcgcttttcgtccttctcaaaccatctgaaagaaaactacgttcaccgtctccac
cagcagcagctgtatcacaacgtctccgcagtcctccgggacatgtgcaccgtgtttgcc
gggccgtttccagccaacttttccaaaagagaagtgaagcggctgtttggttgctgcggg
ccggtccacaaagtccaaatgtggaacacaggagtcaggattcacgccaaggtggagttt
cagatgctagaaggagcgacgctcgctttagaagttctgaatgggttcagcgtgtcgggt
cagatcatcaaggtgcagaggcctgtcaaagagtcaatgctggacttggatctgaatctg
gacgctctaatgtgcgacagagttaacagcaatcagctttacgtcagtagactgactcag
gatgtggctgagggacttaacgtttctgctacagttaacggccgtctgccaggatggaaa
cctgacggttaccatcctggcagacaaacgaacgggctgctacagacctctaaagtaaac
ggcaaacagctgcatccctggaccaccgcaccggacctgagtgaggaaagtctcagagag
acattcagtccctttgggtcaatcaaaagcgtcaccctgccccgtatacatgcaaggcac
gcatgcattgagtttgagagttccgatagcaaacacgcggcactcggctcctcgcaggac
ctgctgaaaaacgggtatccaacatggccgtcgatcaccccaccacacttacattcatgg
gttggcatggcgacatcgaggaagacacaagacgaagaggaggaagccatggacgagcag
agagctgactcttttaattacgatgggactcagaggaatcaggaagtgagtctcctgaat
aaactggaccgccgactgagcagagtcttcaactcactcccagacgggaccttgtctgtg
gtgctgctgctcggacacaacagcagaggatgtgatcatcccggtttatgttttttggaa
gtcaaaaacggattttaa
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