Poeciliopsis prolifica (blackstripe livebearer): 129377228
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Entry
129377228 CDS
T09758
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129377228 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129377228 (capn3a)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
129377228 (capn3a)
Peptidases and inhibitors [BR:
pprl01002
]
Cysteine peptidases
Family C2: calpain family
129377228 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
129377228
NCBI-ProteinID:
XP_054912998
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPIRFNGQDYNTLRQDYLQRKTLFEDEAFPATV
ESLGFKELGHKSNKVKNIVWKRPKEISENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSENYAGIFHFQFWRYGDWVDVVIDDRVPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVDECKPSQQKDNKVRLVRLRNPWGQVE
WNGPWSDNSKEWANLSKADKDKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVVCTFVVSL
MQKNRRKERKMGANLFTIGFAIYEVPKEVRKMHGNKQHMQKDFFLVNSSKARSRSYINLR
EVTQRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASVG
EESEEDQQFRTIFQEIAGDDMEITAGELRNVLNRVITTHKDLNTEGFSLESCRSMIALMD
VSFMDGTGRLNLQEFIHLWNKIKQWQGIFKHYNADQTGSINSYEMRNAVNDAGFRLNNQL
YDIITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccatacacgccatctggctttttctgcgaccggttgatccgggaacgagaaaggaga
gacggggaagggtccctgaacaagcccatccggttcaacggacaggactacaacaccctg
agacaggactacctgcagaggaagactctgtttgaggatgaagcgttccccgccacagtg
gagtctctgggcttcaaggagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcctaaggaaatcagtgaaaaccctcagttcattgttggaggagcgagtaggaca
gacatctgtcagggagatcttggtgattgctggttgctcgccgccattgcttgtctcacc
ctgaatgagaaactcctctaccgagtcgttccccaggagcaaagcttctctgagaattat
gccggcatctttcacttccagttctggcgttacggtgactgggtcgatgtcgtcattgac
gaccgcgtcccgactttcaacaaccagctggtcttcactaagtcggccgagagaaacgag
ttctggagtgccctgctggagaaggcctacgcaaagcttcacggctcttacgaggccctg
aaaggcgggaacaccacggaagccatggaggatttcacgggaggcgtcacagagttttac
gagatgaaggaagctccaaaagagctttataagatcatgaagaaagccctggagagaggc
tcactcatgggctgctccattgattctctggttcccgctcgctttgagacccgcacggtg
acgggactagtgaagggtcacgcctactccgtgacggcggtggacgagtgtaaaccctct
cagcagaaggacaacaaagtccgtctggtgcgtctcaggaacccctggggtcaagtggaa
tggaacggcccctggagtgacaactccaaagagtgggccaatctctccaaggctgacaaa
gacaaactgcagcaccaaagcgcagaggacggagagttctggatgtcgtttgaggacttc
aagaagaattacactaagattgagatctgcaacctgacacccgacgccctcgaggacgac
aagatccacaagtggacggtttctgtgaacgagggccgctgggtcagaggctgctccgcc
ggaggctgcagaaactatccagacaccttctggaccaatcctcagtaccgcctccgcctg
ctggaggaggacgacgatccggaggacaacgaggtggtctgcaccttcgtggtgtccctg
atgcagaagaacagacgaaaagagcgaaagatgggggccaacctcttcaccatcggattc
gccatttacgaggtgccaaaggaggtgaggaagatgcacggaaacaagcagcacatgcag
aaggatttcttcttggtcaactcctccaaggcccgctccaggtcctacatcaacctgcgg
gaggtgacgcagcgcttccgcctgagccccggcgagtacgtcatcgtgccttccacgtac
gagccgcaccaggagggggagttcatcctgagagtcttctctgaaaagaggaacacctca
gaggagatagagaacaggatcgaagcggaccatccggtgccggctccagcctcggtgggg
gaggagagcgaggaggaccagcagttccggactatttttcaggagatagccggcgacgac
atggagatcacggccggtgagctgaggaacgttctcaacagggtgatcaccacgcataaa
gacctgaacacggagggcttcagcctggagagctgcaggagcatgattgctctgatggac
gtatcctttatggacgggacaggaagactcaacctgcaggagttcatacatctgtggaat
aagatcaagcagtggcagggaatcttcaaacattacaacgccgatcaaaccggcagcatc
aacagctacgagatgaggaacgccgtcaacgacgcaggcttccgtctcaacaaccagctg
tacgacatcatcaccatgcgctacgccaacgagaacatgaacatcgacttcgacagcttc
atcagctgcctggttcggctggaagccatgttcagggccttccaagcatttgaccaggat
ggggacggaaccatcagactcagcgtcctggagtggctccagttgaccatgtacgcctag
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integrated database retrieval system
