Poeciliopsis prolifica (blackstripe livebearer): 129377310
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Entry
129377310 CDS
T09758
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129377310 (brf1a)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
129377310 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
129377310
NCBI-ProteinID:
XP_054913144
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MSSRVCKHCGSSDIDVDQARGDAVCMGCGSVLEDSIIVSEVEFVETGGGGSLAVGQFVSS
EGGLKNPTFGDGHFSGMGSESRAQTLQRAKQHINTLGHQLQLNQHCLDTAFNFYKMALNK
TLTRGRKSDHIMAACIYLVCRTEGTPHMLLDLSDILQVNVFVLGKTFLALAKELCINAPA
IDPCLYIPRFTQMLEFGEKSREVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARLH
DFCRTTKEIVNVVKVCESTLRKRLTEFEDTPTSQLTIEEFMRVDLDEECDPPCFTAGLRK
NKDQQLKLELQKKMDDFEDEIQEFQDEIDAELESCRPKLRGVYAAYTKEDILSDDGSSSS
SKEEPDEGNELHAVAKHFGRELEELTLEALIKLEGGELEQENQDENVPQRKGPSLASILG
RMSSSSSLGLSETFSHPVGDNVENDGAADSGELDLSGIDDSEINLYLLSDKEVQIKTALW
MAENADYLKAQKEKEAKIQKEKELGIYKERKPRRPSKKHPAIRASSADEAIEKMLEQKKI
STKINYDVLKDLVVKPGSSPADVGESPKVEPLAPRTPTCTRRPAPSRTSLSLSMPLNSLG
KRLQPFISRQPKKKLAVEQTEAPPPRAVTAEAPPSAVVESGPVLYDDADEEEDEEEETCV
SAMELLGGDGYGCDGDYDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgtaagcactgcggcagctcggacatcgacgttgaccaggcgcgt
ggcgatgccgtctgcatgggctgcggctccgttctggaggacagcatcatcgtctccgag
gtggagtttgtagagacgggcggcggaggctccctggctgttggacagtttgtgtcttca
gaaggtggtcttaaaaatccaacttttggtgatggacacttctcagggatggggtcagag
tccagagctcagacgttgcagagagctaaacaacacatcaacaccctgggccaccagcta
cagttgaaccagcactgcctggacacggccttcaacttttacaagatggccctcaataaa
accctgacacgcggccgcaagtcggatcacatcatggctgcctgcatctacctggtctgc
cgtaccgagggaacgcctcacatgctgctggatctcagtgacattttgcaggtgaatgtc
tttgtgctgggaaaaaccttcctcgcgctggccaaggaactttgcatcaacgctccagct
atagacccatgtctttatataccccgtttcacccaaatgctggaatttggcgagaagagc
cgcgaggtctccatgacggcactgcgactggttcagcggatgaaaagggactggatgcac
acgggaaggcggccatctggactctgtggagcagctcttcttgttgctgctcgtttgcac
gacttttgtcgcaccaccaaagaaatcgtgaacgtggtgaaggtctgtgagagcacgctg
aggaaaaggctgacggagtttgaggacacgcccacaagtcagttgaccatagaggagttt
atgagagtagatctggacgaggagtgtgacccaccgtgttttacagccggactgaggaag
aacaaagaccagcagctgaaactggagctccagaaaaagatggatgactttgaagatgaa
atccaggagttccaggatgaaatagatgcagagctggagagctgcagacccaagctgaga
ggagtttacgctgcctacaccaaggaagatatcttaagtgatgacggtagttcctcgtca
tctaaagaggaaccggacgaaggcaacgagcttcacgccgtggcaaagcactttggtaga
gaactggaagagctcaccctggaggctctcatcaaactagaagggggagagttagagcag
gagaaccaggacgagaatgtccctcagcgaaaaggtccctcactggcttccatactagga
agaatgtcctcctcgtcctctctgggcctctcagagaccttcagccaccctgttggggac
aacgtggagaacgatggcgctgctgacagcggagagctggacctgagtggcatagatgac
agtgagatcaatttgtatctgctaagtgacaaagaagtccaaatcaaaactgccctctgg
atggcagaaaatgcagactacctaaaagcgcaaaaagaaaaggaagcaaagatccaaaaa
gagaaggagcttgggatctataaagaaagaaagcccagacggccctcaaaaaagcaccct
gccatcagagccagctctgctgatgaggccattgagaagatgttggagcagaagaagata
tccaccaagatcaactacgacgtgttaaaggacctcgtggtgaagcctggcagcagcccg
gctgatgtgggagagtcaccgaaggtggagccgctggcccctaggacgcccacctgcacc
cgcagacctgcgcccagcagaacctcactgagcctcagcatgccgctcaactctctggga
aaacgactgcagccgttcatcagcagacaacccaagaagaagctggctgtggagcagact
gaagcccctcccccccgagcagtgacagcagaggccccgcccagtgcagttgtcgagagt
gggccagtcctgtatgatgatgcagacgaggaagaggacgaagaggaggagacctgtgtc
agtgccatggagctgctgggcggcgacggttatggatgtgacggggattatgatgatggg
tactag
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