Poeciliopsis prolifica (blackstripe livebearer): 129377364
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Entry
129377364 CDS
T09758
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129377364 (shprh)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129377364 (shprh)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129377364 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
TPR_10
TPR_12
Motif
Other DBs
NCBI-GeneID:
129377364
NCBI-ProteinID:
XP_054913234
LinkDB
All DBs
Position
Unknown
AA seq
1661 aa
AA seq
DB search
MSSRRKRAPPVRVDEESKRRLEWNMLEDRKNEAVQEDDQTPSSSSCLSGDPTACTSFLSS
VEDITQEDACSRSVQLSDKLPSTSLDSGAPSASLALSVVPALKLGHVWKALIGEFSIRPA
WLPSDYEQRSFLAYRTGKQLYLSYSSCDENSEPRWSPEEDGCAVECSLSRIPFEDLDWLQ
KRRVVQLCHQTKEQEVKVGIYLLETGLGKPEFLSEGNARPKKATQIMQKLMEYFYDFIIP
EVVENEEEECDTDLERQNVEELYDYVRHQHQKENQDATYDVQHKVLIPVLRPYQSQAVNW
MLRREKYNINAPKEHSLHFLWREVVTLCGKKLFYNPFTGCLIREFPLAGIEWPGGILADE
MGLGKTVEVLALILFHTRQNLEQEALTLPVGKSVNYFVPPRPIEVKATRCKPEAQPKIKT
SHPAVRVMLLNAIKEMRTGKGASVNAVFTYIRATYGYDLLKNRNHIKKTLAKLINEGFVD
RVKGRGLAGSFKLGKNYKETKKILSAASKLIFRPAENTPRKTFQRRAKEKAEAALQNSLS
DDRRDQSPASDRRDTEGKEQKQWEKNANRKAALEDGVTSTGSAAVSLQLSLGKLVSDTQE
IPRADRGGEASGTDSQDETETPTRASVVPFNTADYRFECICGELGIIDYKPRVQCMNCQL
WQHAECVNYKEESLTTTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRHIRSSS
LRVLVYQGVKKHGFIQPRMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRNQKRYM
AVPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASVNRWCVSGTPVQRGLEDLYGLT
LFLGIDPYWVKYWWDQLLYRPYRRGNTEPLYNVIAQILWRSAKKDVLDQIQIPPQTEEVH
WLHFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVNTILYPLLRLRQACC
HPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIRGEFVE
AAEMYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLSAKHRGIPPTLRDDRLGEEAEQL
RQHYMTKYDLEVADAHQALQPVLQNIKELKRKVNLNSPWWLEVIQMSTHCSTDEDLVVRV
KNELTSSYKQQANKLSMADKFRDACGLQFLLTTQMQDLMKSQKTVQGAVKSLEGPASKEV
IEEATICHLRPMRLPLNNCVFCKADELFTDYESKLFAHTVKGQTAIFEEMIEDEEGLVDD
RLPTTSRGLWAASETERTLKAILSFAKSKRMDPELVEEGNMFMELFENWKKEYKVLHEYW
MVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAVAKSQLQ
KKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAIIVEQY
SVGSRRRAIKCAICRQTTSHTEISYVFTTQSSSHDQDVPVKGSHSTKVEAVVRTLKQIQM
NDPGAKCLVFSTWQSVLDIIAKALLDNNLEFSQINGIHKFQENLCSFKYDEKINILLLPL
HTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERMQA
MLKTAEKSCSHTSTAMKHSEAAVLTVADLADLFTEDTEPLE
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcgaaggaagagggcccctcctgtgagggtggatgaagaatcaaagaggagg
ctggaatggaacatgctggaggaccggaagaacgaagccgtccaggaagacgaccagact
ccgtcctcctcttcctgtctatcaggcgaccctaccgcctgcacttcttttctctcctct
gtagaagacatcacccaggaggacgcgtgctctcgttcggttcagttgtcagacaaactt
cccagcacgtctttggacagcggcgccccctccgcctctctggcgctctctgtggtgccg
gctttaaagcttggccatgtctggaaggctcttatcggggagttcagcatcaggccggct
tggctgccgtctgactatgagcagagatcttttctggcgtaccggacgggcaagcagctc
tacctcagttacagcagctgcgatgagaactcggagccgcggtggagccctgaggaggac
ggctgtgccgtggagtgcagcctcagcaggatcccattcgaggacctcgactggctgcag
aagaggagggtggtgcaactctgccaccagaccaaggagcaggaagttaaggtgggaatt
tacctgctggaaactggtctggggaagccagagttcctcagcgagggaaacgctcggccg
aagaaagcgactcagataatgcagaagttgatggaatatttttacgatttcatcattcct
gaagtcgtagagaacgaggaggaggagtgcgacactgatctggagagacagaacgtggag
gagctctacgattacgtgaggcaccagcaccagaaggagaaccaggatgcaacatacgac
gtccagcacaaggttctgattcccgtcctcaggccctatcagagccaggccgtcaactgg
atgctgaggagagagaagtacaacattaacgcaccgaaagaacattccctgcattttctg
tggcgagaggttgtgactttatgtggcaagaagttgttctataatccctttaccggctgc
ttaattcgagaattcccgctggccggaatcgagtggcctggtgggatcctggccgatgag
atggggctcgggaaaacggtggaggttttggcgcttattctcttccatactcgtcagaat
ctggagcaggaagccctcacgctgccagtgggaaaatctgtgaattactttgttcctcct
cgtccaatagaagtgaaagctactcgctgcaagcctgaagctcagccaaaaataaaaaca
tcacacccagctgtgcgcgtgatgttgctaaatgcaataaaggagatgcggactggcaaa
ggagcctcagtcaacgctgtgttcacctacatccgggctacttacggctacgacctcctg
aagaaccgcaatcacatcaaaaagacgcttgcgaagctcataaacgaaggatttgttgac
cgggtaaagggccggggtctggcgggttctttcaagttggggaagaactacaaagaaaca
aagaaaatcttgtccgcggcgtccaagttgatcttcagaccagcagagaacacgccaagg
aagacgtttcagaggcgagcaaaggagaaagcggaggcggctctccagaactccctctca
gacgatcgaagagatcagagccccgcatcggaccggcgtgacacagagggaaaagaacaa
aagcaatgggagaaaaatgcgaacaggaaggccgctctggaagatggtgtgacatcgacg
ggttccgccgcagtatctttacagctttctctgggtaaacttgtgtcagacacacaggag
attcccagagcagacagaggaggagaagcctctgggacagattcgcaggacgagacggaa
actcccaccagagcgtccgtagtgccgttcaacaccgcggattaccgcttcgagtgcatc
tgcggcgagctgggcattattgactacaagccgcgtgtgcagtgtatgaactgtcagctg
tggcagcacgcagaatgtgtgaactataaggaggagagcctcacaacaacacccttctac
tgccctcactgcctggttgctatgaaaccagtgtccactggtgccacgctcatcatttcg
cccagctccatctgccaccagtgggtggaggagatcaaccgccacatcaggtcctcctcc
ctgcgcgtgctggtgtatcagggcgtgaagaaacacgggtttatccagcctcggatgctt
gcagagcaggacgtggtcatcaccacctacgacgttcttcgctctgagctcaactatgtt
gacatcccccacagcaacagcaaggacggccgacgcttccgcaaccagaagcgctacatg
gcggtccccagccctctggtggccgtggagtggtggcgcatctgtctggacgaggcccag
atggtcgagtgtcccactgccaaggctgcagaaatggctctgcgccttgcctccgtcaac
cgttggtgcgtcagcggcactcccgtccaacgaggccttgaagatctgtacggcctgacg
ctttttcttggaattgatccatactgggtgaaatactggtgggaccagctgctttatcgc
ccctatcgccgtggaaacacagaacctctgtacaatgtgattgctcagatattgtggcgg
tcggctaaaaaggacgtcctcgatcagattcagatcccccctcagacagaggaggtgcac
tggcttcacttttctcctgttgagggccatttctaccatcgccagcacgaggtctgctcc
caggacgctctggtcaaactcaggaaaatctcagactggagcctgaaactgggcagcctg
gaccggcgcaccgtcaacaccattctgtacccactgctgaggctgcgccaggcctgctgc
catccgcaggccgtgaggggggagttcctgcccctgcagaaaagcaccatgacaatggag
gagctcctcaagtccttgcagaagaaatgtcgagtggagtgtgaagaagctcacagacag
ctggtgtgcgcactcaacggcttggctggaattcacatcatccgaggcgagtttgtagag
gctgcggagatgtatagagaagttctgcgctcatcagaggagcacaaaggcagactgaaa
actgattcactacagcgacttcatgccactcacaacctaatggagctgctcagtgcaaag
catcgcgggattcctccaacactcagagacgaccgactcggtgaagaggctgagcagctg
cggcagcattacatgaccaaatacgacttggaggtggccgacgcccatcaggccctgcag
cccgtgctgcagaacatcaaagagctgaagcggaaagtgaacttgaactccccctggtgg
ttggaagtcatccagatgtcaacccactgttccaccgacgaagatctggtggtccgtgtg
aagaatgagttaacttccagctacaagcagcaggccaacaaactctccatggcagacaag
ttccgtgacgcttgtggtctgcagttccttctcaccacacaaatgcaagatctaatgaag
tcacaaaagaccgtccagggcgcagtgaagagtcttgagggcccggcttctaaggaagtg
attgaagaggctaccatttgccatcttaggccaatgcgactgccactcaataactgtgtg
ttttgtaaagctgacgagcttttcaccgattacgaatccaagttgtttgctcacacagtg
aaaggccagacggccatcttcgaagagatgatcgaggacgaggaaggcctggtggacgac
cgcctccccaccaccagccgcggtctgtgggcggcgagcgagacggagcgcactctgaaa
gccatcctgtcgttcgccaaatctaagcgcatggacccggagctggtggaggagggcaat
atgttcatggagctgtttgagaactggaagaaggagtataaggtgttgcatgagtactgg
atggtgctgcgcaatcacgtgtcggccattgacgagttgggcatggcgactgaacggctg
cgcgttcgtctgcctgacgagccgaagcccaaactgctgcacattatagaaccacatgag
gtggagcagaacagggtcaagctcctgaacgaccaagctgtggctaagtctcaactccaa
aagaagcttggacagtttctgtatctaaccaatctggaaaagtcacaggacaagtcaact
ggagggctgaacccagagccatgccccatctgtgctcgtcctctggggcaggagtgggcc
gtgttgacctgcggccactgcttctgtaatgagtgcatcgccatcatcgttgagcagtac
agcgtgggctcaaggcggcgagccatcaagtgtgccatttgtagacagaccacttcccac
acagaaatctcctacgtgttcactacccagtcatccagccacgaccaggacgtacctgtc
aagggaagccactctaccaaagtggaggcggttgtgagaacactaaagcagatccagatg
aacgatcccggagccaaatgtctcgtcttttcaacgtggcagagtgtcctggacatcatc
gccaaggccttgttggacaataacctggagttttcacaaatcaatggaattcataagttc
caggagaatctttgttctttcaaatacgatgaaaagatcaatattctcctcctcccactc
cacactggctccaatgggctgaatatcatcgaagcaacacacgtgttgctggtcgaaccg
atcctcaacccagctcacgaactccaggctatagggagggtgcaccggattggccaaaca
aagccgacatttgtacacagattcctgatcaaatccactattgaggagcgaatgcaagcg
atgctgaagacggcagagaagagttgcagtcacaccagcacggccatgaagcattcggag
gctgccgttctgacggtagctgacctggccgatctgtttacggaggacactgaacctctg
gagtga
DBGET
integrated database retrieval system
