Poeciliopsis prolifica (blackstripe livebearer): 129377562
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Entry
129377562 CDS
T09758
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129377562 (mms19)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129377562 (mms19)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129377562 (mms19)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
129377562 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
TOR1L1_N
API5
Adaptin_N
HEAT_Maestro
Cnd1
Sec7-like_HUS
CLASP_N
Motif
Other DBs
NCBI-GeneID:
129377562
NCBI-ProteinID:
XP_054913578
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MLVGLIDLNFSRMRNPQRRDRDTMAAESPLLLSLVEEFVSGLQDSKAKDAAAGVKDGHFT
VLQLVEALGQSLTSSQPHTRARGVQLLSEVLQDNYGALTETEVELLQAFYENRLKDHYVI
TPPVLRGLLALTKSRKLPPGSAVSMLRTVFQDVHVQSLMLAERACVYNMLINLMESREDE
LKGLGADFVFGFVQSMDGERDPRNLLLAFQIARNIVLRGYSIDKFSEELFEVTSCYFPID
FSPPPNDPHGITKEELIQALRAVLTGTPKFAEFLLPLIIEKLDSDVQSAKLDSLQTLAAS
VGQYEHRDLADFLEGLWSSLRREVFQTSSEKIEAAALAAVTALASCLSRSVLNSDSEDSL
SSFLGLVLRDCKQHLFEPDLKLVWPSAKLLQAACSASFRAAHSITSAVMPPLVEQYNSRT
QCSHRRTLLEVAQRFIQSTASCQSVDHDESLFSAYKDSLCSLVFSALSESNSSLQITAAS
VLTSLAQQPGLLLDSDIELAVDHLTRLLLTDEDERVSVAVVECAGALAERHPAAFITKLI
PTLKKEMFSDQTELSEVRSHHAVRQRCLSALAAVSVQGSIVMESAPVLLDVLGSAHADPD
RFSVDEVVRACLSLQRIAERVEDGKDTSRFFHDVVVPRLLSLALQASLQSDGSSGRRSPL
VAEEILSAMVPVISTACSRLQTFAEQTASRAVSLFLDGDVSFLPDNSFPPRLQLLQQQQQ
EQQEDSSWRQTQLVCLLMACVCSLPRSVALPQEERLLSVLEELSCSCRHPLSYTSAAKCF
AGLVNKKPQGPSLDSLIQGVIKRVSSELDRPSSPLRSQAFTLLIWVAKALLLRYHPLFPA
LTDKVFSLLDDALLGPVAADSFSLLMSDSADVLNRGCHADVRIMYRQRFFSENSAKLVQG
FNAAPQEKKANYLKALSNIVNKLPKQVQVSELPALLTLLLEALTCPDEGVQLSTLSCLQP
VLINPPQVLILQLEALVGRLLALVGSPAMKIRMASIRCVLALSHFPAHEVLPFRSRVLRA
LAPPLDDRKRLVRREAVQARAEWFLLGSPGGR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttagttggtcttatcgacctgaacttctcgcgcatgcgcaatccccagcggcgtgac
agagacacgatggctgcagaaagtcctttgctgctgtctctggtggaggaatttgtctca
ggacttcaggacagcaaggcgaaggacgctgcggcaggtgtcaaagatggacattttacc
gtcctgcagctggtggaggcacttggacagagcctgaccagctcccagcctcacactcgg
gcccgaggggtccagctgctctcggaggtcctccaggacaactacggggcgctaacagag
acagaagtcgaactgctccaggccttctacgaaaaccgcctgaaggaccactacgtcatc
acgccgccggtgttacgagggctgctggcgctgactaaatccaggaagctgcctcctggt
tcggctgtgtcgatgctgaggaccgtgtttcaggatgttcacgtacagtccctgatgctt
gcagagagagcgtgtgtctacaacatgctcatcaacctcatggaaagcagggaagacgaa
ctgaagggtttgggtgcagattttgtttttggtttcgtccaatcgatggacggcgagagg
gatccccgcaaccttctgttggccttccagatcgccagaaacatcgttctgcggggatac
agcattgacaaattcagcgaggagctgttcgaagtgacgtcctgctacttccccatagat
ttctccccgccacccaatgacccccacggcatcaccaaagaggaactgatccaggcgctg
agggccgtcctcaccggaacccccaagtttgcagagttcctgttgccgctcatcatcgag
aagctggactcagacgtccagagcgccaagctggactcgctgcagaccctggctgccagc
gtgggacagtatgagcacagagacttggctgatttcctggagggactgtggagctcgctg
cgcagagaggtgtttcagacatccagcgagaaaattgaggcggctgccctcgccgccgtc
accgcactcgcttcctgtctgtctcgctctgttctcaactctgactctgaagactccctc
agctccttcctgggtctggtgctcagagattgtaagcagcacctgtttgagcctgacttg
aagctagtgtggcccagcgctaagctactccaggcagcctgcagcgcctccttcagggca
gcccacagcattacaagtgctgtcatgccccctctggtggagcagtataacagcagaacg
cagtgttcccacaggcggacgctgctggaggtggcacaacgattcatccagtcaactgct
tcatgtcagtctgtagatcacgatgagagcctgttttctgcgtataaggactccctgtgc
agcttggtgttctcagctctatctgaaagtaactccagtctgcagatcacggccgcctcg
gtgctcacctctctggcccaacaaccaggtctgctgctggactctgacatcgagctcgcc
gtggaccacctgaccaggctgctgctgacggatgaggacgagagagtcagtgtggccgtg
gtggagtgcgccggagccttggccgagcggcaccctgctgccttcatcaccaaactgatc
ccaacgctgaagaaggagatgttttctgaccaaacagagttgtctgaggtgcgttcccat
catgcagtgcgtcagcgctgcctgtccgcgctggccgcggtgtccgtccagggcagcatc
gtcatggagagtgcgcccgtcctcctggacgtcctcggctcggcacacgcagatcctgat
cgtttctccgtggatgaggtggtgcgcgcctgtctgagcctgcagaggatagcggagcgg
gttgaggacggcaaggacacaagtcgattctttcatgacgtcgtcgtcccgcgcctgctg
tctctggcgctccaagcttcactgcaaagcgacgggtcatcgggtcgtcgtagtccgctg
gtagcggaggagattctgtctgccatggttcctgttatcagcaccgcctgctcccgcctg
caaacgtttgcagaacagacggcgtccagggccgtctctctcttcctggacggtgacgtc
tcgtttctgcccgacaactccttcccaccgcgccttcagctgctccagcagcagcagcag
gagcagcaggaggattcatcgtggcgtcagacccagttggtgtgtctgctgatggcctgc
gtgtgttcgttacctcgcagcgtggcgctgccccaggaggagcggctgctctcggtgctg
gaggagctgagctgcagctgcagacacccgctctcctacacgtcggctgccaaatgcttc
gccggcctggtcaacaagaagcctcaggggccttctcttgacagtttaattcagggagtg
ataaagagagtgagcagtgagttggaccgaccctcctcccctctgcgctctcaggccttc
acgcttctgatctgggttgccaaggctctgctgctgcggtaccaccctttatttccagcg
ctaaccgacaaggtcttctctctgctggacgacgccctcctcggcccagtggccgctgac
agcttctcgctactgatgagcgactctgccgacgtcctgaaccgcggttgccacgccgac
gtccgcatcatgtatcggcagcggttcttcagcgagaattctgccaagctggtgcagggc
ttcaacgctgcgccgcaagagaagaaagccaactacctgaaggctctgtccaacatcgtc
aacaagttgccgaagcaggtccaggtgtctgagctgccggctctcctgactctgctgctg
gaggccttgacgtgtcctgacgagggagtccagctgtccactctgtcctgcctgcagccc
gtcctcataaaccccccgcaggtcctgatcctgcagctggaggccctggtcggccggctg
ctggccctcgtcggcagtccagccatgaaaatccgcatggcctccatacgatgcgttctc
gctctctcccatttcccggctcacgaggtgttgccattccggtcgcgcgttctgcgagcg
ttggctccgcccctggatgaccggaagcggctggtgaggagagaggcggtccaggccaga
gcggagtggttcctgttaggaagccctggtggaaggtga
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