Poeciliopsis prolifica (blackstripe livebearer): 129377597
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Entry
129377597 CDS
T09758
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129377597 (hps3)
Membrane trafficking [BR:
pprl04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
129377597 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
129377597
NCBI-ProteinID:
XP_054913653
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MVHVYNCHPFTSQQIVQVEQEPGLVCCGGGALFVVTTGGCKVEVYNLETEGCPLICRFAS
MGTVRRIQHSSIGDYLVTIEEKNSATYLRVYTNWRHQAEEKSRIGVRLLGHLIRGASVWG
GVQMEIIEIPLSEHPVSLACCAVTGDLLVGCENTLVLFALRRHTQQNLQNLQSSWSNSEQ
SCSQSPGQTSCQNQELSVLDFERSVILHLSKITPKQVALCGSYVAVQAELEVLVLKLEAT
AEPTGEEEPSDSFKSEDYSEEQSDFLLVPKHQELLGDRARTCDVPVSVEQTGLEDGRRYT
LSYLLFRRFSPEFFQGCSVEEIQLHSLQLHPMFTSKQDEPACMFCFFSLPTAGYLYSLRG
GVELLSTYQYPEKVLQAVLTDHLLHVITRNALQSFTVRCAALAARVEDPYIDTTMKACPP
CSLEVCALRMQLFIGLRSLCVYGRHVVLLSTADVEAPEETERHTQRRGLNLKEHNMLTGI
FLAVGIDPATTPALENLLSHPFLSRRWVISPPKETSPAGHGWNLYVVDTVPPITLYQEMV
EYSQRYAETNPQGLSLRHLLSEAHLLLRSSLLEERQASEGVSKMAAQSYREELEEAFRQN
SAQLGDSFSRGSQKDCHLALPYYRMSGLSVTEVMSRNRPLPGSPHSYGPGFLFYLKNYLL
ETTDQSLSQEDADEVARIFSQSEPSMLVSVCASPCMMNVDPAAALQILQRLEETSGVSVP
LTITMATMMLRLGDVARCTELMERHAELLLVYGFIEEPRLLLQAGGGKRPQVGPTALAGQ
LADSRPGLLVAAMVALHENNKVQLEAADHVFKELGRECSLQVDFWEAMLMASSQDAVIQE
LLFRLASVYIDRLTAGESPTKHKSLKSAEDLISCCSHYGALYPWLTVLNPAHSSSHQHQE
ALHKLQSLLCGPSLSIGNVAPLLESLTEETLWGFSLHLLCATRRGQYGSSIERLLDRCPQ
AIIAYANHQLQDKHMALWWQKLLPELCSRTRAAADDGVLLGALTETLVVVAMETTPAEFL
ELLPDDGSASYFLPHLLTCSQRRLPA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtctacaactgccatcctttcacttcacagcagattgtgcaggtggaacag
gaacctggactcgtgtgctgtggaggcggagcgctgtttgttgtgacaacaggaggatgc
aaggtggaggtgtacaatttggaaacagagggctgccctctcatatgccgttttgctagc
atgggcaccgtgaggaggatccagcacagctccatcggagactacttggtaaccatagaa
gaaaaaaacagcgccacctatctgagggtttacacaaactggcggcaccaggcggaggag
aagtcccgtattggggtgcgtttactgggccacttgattcgcggcgcatcagtctggggc
ggagtgcagatggagatcatcgagatcccgctgtcggagcatcccgtgtccctggcatgc
tgcgcggtgactggagacctcctggtgggctgcgagaacacgctggttcttttcgccttg
aggcgacacacccagcagaacctgcagaacctccagagctcctggtccaactcagagcag
agctgcagtcagagtccaggtcaaacttcttgtcaaaatcaggaactttctgtcttggac
tttgaacgttcggtcatcctgcatctctccaaaattactcctaagcaggtggcgctgtgt
ggaagttacgtggcagtccaggctgagctggaagttctggttctgaaactggaagcaacg
gccgagcccacaggcgaagaggagccatcagattcctttaaaagtgaggattattcagaa
gagcagagcgacttcctgctggttccgaagcaccaggagctgctgggggaccgagccaga
acctgcgacgtccccgtcagtgtggagcagaccggcctggaggacgggaggcgctacacg
ctctcctaccttctgttcaggcgtttttctccagagttctttcaaggctgcagtgtggag
gagattcagctccactcgctgcagctccaccccatgttcaccagtaagcaggacgaaccg
gcctgcatgttctgcttcttctctcttcccacggcgggatacctctacagtctgaggggc
ggggttgagctcctctccacctatcagtatccagagaaggtgctgcaggcggtgctcaca
gatcacctgttgcacgtcataaccaggaatgcgctgcagtcgtttacggtgcgttgtgcc
gcactcgcagccagggttgaagacccctacattgacaccaccatgaaggcttgtccgccg
tgcagcctggaggtgtgcgcgctcagaatgcagttatttattggtctgcgatcgctgtgt
gtctacggccgccatgttgtcctcctctccactgctgacgtagaagcaccagaggaaacg
gaacgccacacacagcgccggggcctcaatttgaaagagcacaacatgctgactggtatt
ttccttgcggtgggaatcgatcccgcaaccacaccagctctggagaacctcctgtcacat
cccttcctgagcaggaggtgggtcatctcaccccccaaagaaaccagtcctgctggacac
gggtggaatctgtatgttgtcgacaccgtaccgcccatcacgctctatcaggagatggtt
gagtacagccaacgctacgcagagacgaacccacagggcttgagtcttcgtcacctcctc
agtgaagcccacctcctgctgcgctcctccctgctggaggagcggcaggccagcgaaggc
gtcagtaagatggccgcccagtcgtacagggaggagctggaggaggcgttcagacagaac
tctgcccagcttggagacagtttcagcaggggcagtcagaaggattgccaccttgctttg
ccgtactacaggatgtccggcctgtcggtcaccgaggtcatgtccagaaaccgtccactc
ccaggcagccctcactcctacggacccggtttcctgttttatctgaagaattacctgtta
gagacaacggaccagagcctcagtcaggaagacgcagatgaggtcgctagaattttcagc
caatcagagccctcgatgctggtcagcgtgtgcgccagcccgtgcatgatgaacgtggac
ccggctgcagcgctgcagattttacagcgtctggaggaaacgtctggcgtgtcggtgcct
ctgacaatcaccatggcgaccatgatgctgcgcctgggcgacgtggcgcggtgcacggag
ctgatggagcgacacgccgagttgctgctggtgtacgggttcatcgaggagccgcggttg
ctgctgcaggctggaggagggaagcggcctcaggtgggtccgacggcgttggccggccag
ctggccgactcccggcctggactcctggtggcggccatggtggctctacacgagaacaac
aaggtgcagctggaggcggctgatcacgtctttaaggagctgggacgtgagtgcagcctg
caggtggacttttgggaggcgatgctcatggcgtcctcccaggatgccgtcattcaggag
cttctgttccgactcgcttcggtttacatcgaccgactgacggccggcgaatccccgaca
aaacacaagtcgctgaaaagtgcggaggacctgatcagctgctgctctcattacggtgcc
ctctacccgtggctcaccgtcctgaacccagctcacagttccagccaccaacaccaggag
gcgctgcacaaactgcagtcgttgctgtgcggtccgtccctctccatcggtaacgttgct
cctctgttggagagtctgactgaggaaacgctgtggggcttcagcctgcacctcctctgt
gccaccagaagggggcagtatggcagcagcattgagcggctgttggaccgctgtcctcag
gccatcatcgcctacgccaaccaccagctgcaggacaaacacatggctctctggtggcag
aagcttcttcctgagctgtgcagccggacgcgagcggccgccgatgacggcgttctgctc
ggagctctgacagagacgctggtggtggttgcaatggagacgacccccgcagagtttctg
gagctcctgccggacgacggctcggcgtcgtacttcctgcctcacctgctgacctgcagc
cagaggcgcctgccggcctga
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integrated database retrieval system
