Poeciliopsis prolifica (blackstripe livebearer): 129377767
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Entry
129377767 CDS
T09758
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129377767 (lrrc4bb)
04517 IgSF CAM signaling
129377767 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129377767 (lrrc4bb)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
NGL family
129377767 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
DUF7498
Motif
Other DBs
NCBI-GeneID:
129377767
NCBI-ProteinID:
XP_054913887
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MRLVMVTSPCTPSPVLWLVQLLLWFHHHGPQLTEAAPPCPNPCTCSNQASRVICTRKSLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPTQAFEYLSKLRELWLRNNPIETLPAFAFNRVPSLRRLDLGELRKLGFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVTIIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQTHFVCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPTNSYSYFTTVTVESVEPREDEYSARQYVNETFVGSPKPPG
HGGVDGLSSSTISPSLSTLSPLSPRTTENSVTVSLMDVTNIPGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTINSGTGT
EGTLRIHHPEVVNLPNIGRSDTLNHYYKTHHFNNNVMGLSITEGMGPGGILNSKNQHGQD
NPISCTSVPISTSNLLSASGNGTNTSSMSPPLPMSLPMPTMGLHGSIKGFMGQNQNPQME
PLLFKGSSKENVQETQI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgtcatggtgaccagcccctgcaccccttcccccgtcctctggttggtccag
ctcctgttgtggtttcaccaccatggaccccagctgacagaggcggcaccaccatgcccc
aacccctgcacctgctccaaccaggcgagccgggtcatctgtacaaggaagagtttggat
caaatcccagacagcatttcagaaaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacattcaagcatctgcggcatctagaaattctccagctctcc
aagaaccacatccggcaaattgaggtgggagctttcaatggcctccccaacctcaacacg
ttggagctttttgacaaccgtcttacagtggtaccaactcaagcttttgagtacctcagc
aaactaagagaactatggctacgaaacaaccccattgagacactgccagcctttgctttt
aaccgcgttccctcattaagacgtctggatctgggggaactcaggaagttgggtttcatc
tcagaggctgccttcgaaggtctggtaaatctgcgttttttgaatcttggcatgtgcggc
ttgaaggacatccctaaccttactccgcttgtacgacttgaggagttggagttatcaggg
aatcagctggggattgtccgtcctggatcatttcagggactggtgtcacttcgaaagctt
tggctgatgcactctagagtgactatcattgaacgcaatgcttttgacgacctcaagaac
ttggaggagctcaacctttcccacaattctctgcattctctgccccatgacctgttcacc
cccttgcaccagttggagagggtgcacctcaaccacaatccttgggtttgcaactgtgac
gtcctgtggctcagctggtggcttaaagagacagttcccagcaacaccacgtgttgtgca
cgttgccatgccccgccaggcctgaaaggaaagtacatcggggaactggatcagacccac
tttgtttgctatgctccagtgattgtggagccgcccactgatctgaatgtcaccgaaggc
atggccgcagagctgaaatgccgtaccggaacctctatgacctctgtgaactggttcacc
ccaaacggcacactgatgacacacggatcgtaccgcgttaggatctcagtgcttcatgac
ggaacactgaacttcacgaatgtgaccgtgcaggacaccgggcagtatacctgcatggta
accaactccgctgggaataccactgcaaccgctgtgctcaacgtctctgcttctgatcct
actaacagctacagctatttcaccactgtcacagttgagtcagtggagccaagagaggac
gagtattcagcaagacagtatgtgaatgagacctttgttggttcccccaagcctcctggt
catggaggggtagacggtctatctagcagcactatatcaccatctctgtctactctgtca
ccactgtcacctagaactactgaaaattcagtgactgtgtctctaatggatgtaactaac
attccaggcctggatgatgtaatgaaaacaactaagatcatcatcggttgcttcgtcgcc
atcacttttatggcagctgtgatgctggtggtcttctacaaactccgaaagcaacaccaa
ctacacaaacaccacggccctgccagagcaattgagattgtcaacgtcgaagatgaaatt
ggagctggggctggaagtggcatctctggcggttcgacgataaattctgggactggtacg
gaaggaaccttgagaatacatcacccggaagtagtcaaccttcccaacatcggtcgctcg
gacaccctgaaccattactacaaaacacatcatttcaacaacaatgtgatgggtctcagt
atcaccgaggggatgggaccaggtggaatcctcaacagcaagaaccagcatggccaggac
aaccctatctcctgcacatcagtcccaatctccacatcaaatttgctctctgcatcaggg
aacggcaccaacaccagttccatgtccccaccgctgccgatgtctctccccatgccaact
atgggcttacacggatcgatcaagggtttcatgggccaaaaccagaacccccaaatggag
ccgctgctcttcaaggggagctccaaggaaaacgtccaagagacccagatctaa
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