Poeciliopsis prolifica (blackstripe livebearer): 129377873
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Entry
129377873 CDS
T09758
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129377873 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129377873 (gspt1)
03012 Translation factors [BR:
pprl03012
]
129377873 (gspt1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129377873 (gspt1)
Translation factors [BR:
pprl03012
]
Eukaryotic type
Release factors
129377873 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
129377873
NCBI-ProteinID:
XP_054914063
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MLVKSRLNRYGNFTKRVPPSLNHSSNSSRLNGTAEPAHLDSEGWPTSCSTPEEEEAMDSR
DTAPDSWEQEEDAEAPAPAAELPAAFAALNVNAKPFVPNVNAPVFVPSFLQTSGAGIPAA
DGSPEPAASMEVADTAAPVENGNTEADMAAEEETWEQKEEPGGGEGGGGQEELGTQGGGE
EGGAVGREDEEMMEEEEEEIPLPKVAPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYL
TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTIL
DAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV
LVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPVAECP
WYTGLPFISHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPN
RHTVEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFDAQI
VIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARL
RAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaaatccagactgaatcgctatgggaacttcaccaagcgagttcctccgagt
ctgaaccacagcagcaactcatcgcgtctgaacggaaccgcagaaccggcccacctcgat
tcggagggttggcccacaagttgttcaactccagaagaagaagaagccatggactcgaga
gacacagccccggattcatgggagcaggaggaggacgccgaggccccggctcccgcggcg
gagctcccagccgccttcgccgccctcaatgtgaacgccaagccgttcgtccccaacgtg
aacgccccggtgtttgtgccgagcttccttcagaccagcggcgccggaatcccggctgca
gacgggtctccggaaccagctgctagcatggaggtggcggacacagccgcgccagtggag
aacggaaacacagaggctgacatggcggcggaggaggaaacgtgggagcagaaggaggag
cccgggggaggcgagggaggcggcggacaggaggagctgggaacgcagggaggcggcgaa
gaaggcggcgccgtagggagagaggatgaggagatgatggaggaggaagaggaggaaatt
cccctcccaaaggtggccccgccgccacctgatgcgcccaaaaaggaacatgtgaacgtc
gtcttcatcggtcacgtcgatgctggtaaatccaccatcggagggcagatcatgtacctc
actgggatggtggacaagcgaacgctggagaaatacgaacgagaggcgaaggagaagaac
agggagacatggtatctgtcgtgggctcttgacaccaaccaggaggagcgagacaagggc
aagacggtggaggtggggagggcttactttgagacggagaagaaacatttcaccatcctg
gacgcgccgggacacaagagcttcgtccccaacatgattggcggcgcgtcgcaggccgac
ctggcggttctggtcatttcggccagaaaaggcgagtttgagacgggctttgagaagggc
ggccagacgcgggagcacgccatgctagctaaaacagccggcgttaaacatctgatcgtt
ctggtcaacaagatggatgaccccaccgtgaactggagcctagaaaggtatgaggagtgt
aaagagaagctggtgccatttttaaagaaggtgggcttcaacccaaaaaaggacatccac
ttcatgccttgttctggactcacaggtgccaacctcaaagacccagtggccgagtgtccc
tggtacacgggtctgcccttcatctcccacctggacagtttgccaaacttcaacagatcc
agcgacggcccagtcagactaccgatagtggacaagtacaaggacatggggacggtgatc
ctggggaagctggagtccggctccatcagcaaggctcagcagctggtcatgatgcccaac
aggcacacggtggaggttctgagcctgctgagcgacgacgtggagacggacgacgccggg
ccgggcgagaacctgaagctgcggctcaaaggaatagaagaagaagagattcttcccgga
ttcatcctctgcagcccggacaacctgtgccactcgggccgcaccttcgacgctcagatc
gtcatcattgagcacaagtccatcatttgtcccggttacaacgccgtgcttcacatccac
acctgcatcgaggaggtgcagatcacggcgctgatctgcctggtggacaagaagacgggc
gagaagagcaagacgcggccgcgcttcgtgaagcaggaccaggtgtgcatcgcccggctg
cgggccgcaggcgtcatctgcctagaaaccttcaaggatttcccacagatgggacgcttc
actctgagagacgaagggaaaacgatcgccatcggcaaagtgctgaagctggttccagag
aaggactaa
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integrated database retrieval system
