Poeciliopsis prolifica (blackstripe livebearer): 129377996
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Entry
129377996 CDS
T09758
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129377996 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129377996 (ndc1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129377996 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
129377996
NCBI-ProteinID:
XP_054914199
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MFPSETSCWFIHKVIWWRAAASIAWSVLLLPPTTAVFVFLSKFSFLHPIQTISECLSLLM
SSCLIFSFILLGGVVIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFINSLAHCLMGV
IVGWCCAVTVGNRYETLGCPCKSSDGVPQMGLNEYHLVFLLAGAFVGFSHSLLGVIHNIN
YVSFHPVQQYKYLHFKGSLPLVLKCSAVQAFYSIRNFTVAYFFLGYIPKTWICKTLNLHL
DSSVHRLDSITGFVDLSLLYHLWISATFLLFTWYITLLLFRIFVTEVYSFPVQPTFTEGS
HQCLPRVLTDQQPMILKFLALQDLALLSKHSPSRRGEVFSLSQPGGHPHNWNAVSRECLA
LLADLTQRLVAYHETVATNGRAKSLSSGSERKTSSDTSFTSGTEDLVSPRPTFLTKTPAS
VFARSFAGGPHSPLTAPFTPDLDSPFSSPTLRRLTGPVDQFSPWHGSVQSPHIMRRAPKL
WSTSAESQVSSSPPRSPASIPSPKQEPTKPSFLAQFLQNRKEQVKNFMAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEALSYLVQASFTEDQFGVVQTTLPSILSSMLHLQEAVDRH
FKLPHASSKPVRSANSMEDFTYKTLRFALRATLKTAIYRITTTFGSHLNAVQMSAEHRKR
LQQFLEFKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcagaaacaagctgctggtttatccacaaggttatttggtggagagctgct
gccagcattgcctggtctgtcctgttgttgccgcccaccacggcagtttttgtgtttctc
agcaagttcagttttcttcaccccattcagactatttcagaatgcctgtctctgctgatg
agttcctgtttgattttctccttcatcctgcttggtggagtggtcatcatggttggattc
ttgaatttagagtactatacagttatcccgactattgcctgctctaaaattgcattgctg
ggccagctgcttcaccctcgccagtttatcaactcccttgcccactgcctgatgggagtg
attgtcggttggtgttgtgcagtcactgttggtaacagatatgagacactcgggtgcccg
tgtaaaagtagcgatggtgttcctcagatggggctcaatgagtaccacctcgtctttctg
ctggctggagcatttgttggtttctctcacagcctcctgggagtcatccataacataaat
tatgtctcctttcatcccgttcagcaatacaaatatctccacttcaaagggtccctgccc
ttagtgctgaagtgcagcgccgttcaagcattttactctatcaggaacttcactgttgct
tatttctttctgggttatataccaaaaacatggatctgcaaaactctgaatcttcatttg
gacagctctgtccatcgtctggacagcataactggatttgtggacctgtccctcctctac
cacctgtggatcagcgccaccttcctcctcttcacctggtacatcacattgctgcttttt
aggatctttgtcacagaggtgtacagttttcccgtgcaaccaacttttactgaaggttcc
caccagtgtcttcccagagttctcactgaccaacaaccaatgatcttgaagttcctagcc
ctgcaggacttggctctgctgtccaaacattctccatccagacgcggtgaagtcttcagt
ctcagccaaccaggtggacatcctcataactggaacgcagtcagtagagagtgtctggct
ctgctggctgatctgacgcagagacttgtggcttatcatgaaactgtagcaaccaatggg
agggccaaatctctgtccagtggcagtgaaaggaagacttcatctgacacatcatttacc
tctggtacagaagacctggttagtccaagaccaactttcctaaccaagactcccgcttcg
gtttttgctcgctcttttgctggaggtccacacagccctctgacggcaccgttcacgccg
gacctggacagccccttttcctcccccaccttgcggcggctcactggtccggtggatcaa
ttctcgccgtggcacggctcggtgcagagcccacacatcatgaggcgggcgcccaaactc
tggtccacctctgcagagtcacaggtcagcagcagcccaccacgctctccagcctcaatt
cccagtcccaaacaggaacccaccaaaccaagttttctggcccagttccttcaaaacaga
aaagaacaggttaaaaatttcatggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaagcctccagtcaggccctcttcgccgacagccaggctcacatctgggcgtta
gaagcgctgtcatacctggttcaggcctctttcacagaggaccagtttggggttgttcag
actacattacccagcattctcagctccatgctgcacttacaagaggctgtcgatcgacac
tttaagctgcctcatgcttccagtaagccggtcaggtccgccaacagcatggaggacttt
acctacaaaacactgcgctttgctctcagagccacgctcaagactgccatttacaggata
accaccacctttggaagtcatttaaacgctgtccagatgtctgcagagcaccgaaaaaga
ctgcagcagtttctggagtttaaagaataa
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