Poeciliopsis prolifica (blackstripe livebearer): 129378053
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Entry
129378053 CDS
T09758
Symbol
abca4b
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129378053 (abca4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprl02000
]
129378053 (abca4b)
Transporters [BR:
pprl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129378053 (abca4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
Metallothio_2
Motif
Other DBs
NCBI-GeneID:
129378053
NCBI-ProteinID:
XP_054914279
LinkDB
All DBs
Position
Unknown
AA seq
2312 aa
AA seq
DB search
MKTGSQIRLLLWKNWTLRKRQKIRFLVEISWPVLLFIGLVWLRKANPLYQQHECHFPNKA
LPSAGILPWIQGIFCNANNPCFRYPTQGESPGIVSNYNNSILARFYVDIQEILLNETEVR
QYGRLWREMASFSNFMDTLRNNPSAVAGRGLKIDDILKDDEVLTAFLLRDAGLSESIVYQ
LVNAQLRLEQFAFGIPDLQLKDIACSQALLEHFIIFPSRMGLHGVRNAMCALSQQRLQRI
EDILYANLDFFKIFRLMPQVLDSQGIDLHYWGLVLRGASEKIQVLLKRDSSQELLRVVSS
LFQAGGPSSFTQLMSGVSSLFCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGSKNHNYVYD
DATTPFCNSLMQTLESNPVTKIVWNSVKPLLMGKILYTPDSPAVRQILKSANTTFEELER
LQNMAKAWEEVGPQLWAFFNNSVQMNMIRDTLRNPTVMHFVDNSLVETTFSSKDILNFLH
NGPEADREEGMPNLDWRNIFDFADQIIRMFNQYGECVSLDKFVAYTDESQMIHQALYLLE
ENKFWAGVVFMDMYPWTTSVPQHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQRY
LWGGFAYLQDMIEHGIIKLHTGNDWPLGVYVQQMPYPCYVDDLFMVTLNRCFPMFMVLAW
IYSVSMTVKSIVLEKELRLKETLKAMGVNSGVIWYTWFIDSFIMMTASTALLTAIIIGGK
VLNYSDPLLVFFFLLIFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHILCFAWQ
DRITKNMKLAASLLSPVAFGFGTEYLSRYEEQGLGLQWNNIQTSPLEKDTYSFLTSILMM
VFDSILYGILAWYLDNVFPGQYGIGRPFYFPLQPSYWQKPAPMYQEMTEQDSKKPEAEIQ
ELDVESRGTPETFTCNGSASKKTCKHQSKRERLERERELLKQQQENPNQEEEDLNAGSEG
PVFFEQDPLGLVLGVQIQDLVKVYDGSSRPAVNCLNICFYEGQITSFLGHNGAGKTTTLS
ILTGLYPPTSGTAYVNGRDIKTDIDIIRTSMGMCPQYNILFNHLTVEEHILFYSLLKGRT
PDEAQTEVENMLLDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSGVDP
YSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRIAIISKGQLYCCGSPLFLKNCFGVG
FYLTLVRRMKDIRKRENECDCASDCSCSCSICTKYKDQSQNQHQQLDRVLEGDIDNITSL
IHHHVPEAKLIETIGQELTYLLPNKGFKHRAYASLFRELEETLADMGLSSFGISDTSLEE
IFLKVTADGEAANNATTAEQWMLQGRQNGSKVGVDQEEENNGVNGITSDSSAGKGSRQVK
GFSLILKHFHALLVKRFHHATRSRKDFLAQIVLPATFVLISLIFTLIVPPFGEYPSLTLT
PWMYGQQFTFFSNERPFDPRMKHFTDRLLSMPGLGTRCMLRELPEMMCNTSASDWEQPAV
SPVVHNILQSPEWNQRNPSPSCQCSTSKKLTMMPICPAGAGGLPPRQRVEVTGDIMLDLT
ERNISDYLVKTYPGLIRTSLKSKYWVNEQRYGGLSIGGQLPILDVDPRDIQNVFRQLGRM
LNITGGHYSRLALREIGTFLHFMESEFNVKVWYNNKGWHAMVVFMNVANNAILRAFLPSF
AKPVEYGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERV
TKAKHLQFVSGVSPCVYWVANFFWDMVNYILSTAMVVGIFMAFDKKCYTSPTNLPALIAL
LLLYGWSVTPMMYPMSYVFSIPSTAYVSLSCINLFIGINSSAITFILELFENNRSLLTFN
EWLKKLLLVFPHFCLGRGLIDMAMNQAVTDVYARFGEEYKMDPFRWDFVGKNIFFMLVEG
FVYFSLNLLIQYRFFLDHWLSDCKQTVVQNEDEDVAEERLRIYEGGSKKDILQIRDLSKT
YAGRKRAAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDASSGEATVAGYNILTE
ILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPESEIPRVAEWGIQKLGLTEYAGC
SAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNAIMSVIQDGRAVVLT
SHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYVVTMKIKAAKAGLSPELEPVE
SFMESSFPGCVQREKHYNTLQYEIASSSLARIFQLVVANKDRLSIEDYSVSQTTLDQVFV
NFAKQQTGEDDDVTLHRRTARRDMKISPVKRK
NT seq
6939 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggctcacaaatccgcctgttactgtggaagaactggactcttcgcaaaagg
cagaagatccgtttcctggtggagatctcctggcccgtcttgttattcattggtctggtg
tggctgaggaaggccaatcctctctaccagcagcatgaatgtcacttccccaacaaggcc
ttgccatcggcagggattctcccctggattcagggtatcttttgcaacgctaataatccc
tgcttcagatatccaacacagggagagtcaccgggcatcgtttccaactataacaactcc
atactggcacgattctacgttgacatccaggagattctgctcaacgagacagaggtccgg
cagtatggtagactttggcgtgagatggcgtccttctcaaactttatggacacgttgcgc
aacaatccgtccgccgttgcaggccgtgggctgaagattgatgacattctgaaggacgac
gaggtccttacagctttcctgttaagagacgcaggcctctctgaatctattgtttaccaa
ctcgtcaatgcccagctacgtctggaacagtttgcttttggtatcccagacctacagttg
aaagacatagcatgcagccaagccttgctggagcacttcatcatcttccccagtcgaatg
gggctccatggggtgcgcaatgccatgtgtgccctcagccagcaaaggctgcagagaatt
gaagacatcctttatgcaaatctggacttcttcaagatcttcagactgatgcctcaggtt
ctggacagccaggggattgatctacattactggggtctggttctcaggggagcatcagag
aagatccaagttctgctgaaacgagacagctctcaggagctcctcagggtggtctcctct
ctgttccaagctgggggtccctcctccttcacccagctgatgtccggggtgtccagcctg
ttttgcggatacccggagggcgggggctccagggttctgtccttcaactggtatgaagac
aacaactacaaggtgttcctgggggtgaatggcagcaaaaatcacaactatgtctacgat
gacgccaccactccgttttgtaattccctgatgcagaccctggagtccaaccccgtcaca
aagattgtgtggaattcagtcaagcccctgctgatgggaaagatcctgtacacgcccgac
tccccggccgtccgacagatattaaagagcgctaatacaacatttgaggagctggagaga
ctccagaacatggccaaggcctgggaggaggttggacctcagctttgggctttcttcaac
aacagtgtccagatgaacatgatcagggataccctgaggaacccaacagtgatgcacttt
gtggacaacagtctggtggaaaccacattttcatctaaagatattcttaactttctgcac
aatggaccagaggcagacagggaggagggaatgccaaacttggactggcgtaatattttt
gactttgctgaccaaatcatacgcatgttcaaccaatatggagagtgtgtcagcctggat
aagtttgtggcttacacagatgagtcccagatgatccatcaggctctgtacctgctggag
gagaacaagttctgggcaggtgtggtttttatggacatgtatccctggaccacaagcgtt
cctcagcacgtcaaatacaagatccgcatggacattgacgcagtggagaggaccaacaag
attaaagacaggtactgggatcctggccccagagcggacccgatggaggaccagaggtac
ctgtggggtggcttcgcgtacctgcaggacatgatcgaacatgggatcatcaagcttcac
accggaaatgactggccactgggtgtttacgttcagcagatgccatatccttgctacgtc
gatgacctcttcatggtcacattgaaccgctgcttccccatgttcatggtcttggcctgg
atctattcggtgtccatgactgtgaagagcatcgtcttagagaaggagctgcgcctcaaa
gagaccctcaaagccatgggggtcaacagtggggtcatttggtacacatggttcatcgac
agcttcatcatgatgactgcaagcacagcgctgctgacagccatcataataggcggaaag
gtgctaaattatagcgacccactcctcgtcttcttcttcctgctgattttcactgtggcc
accatcatgcagtgtttcctgatgagcgtgtttttcaacaaagccaacctggctgctgcc
tgcagtggaatcatctacttcaccctctacctgcctcacattctgtgttttgcgtggcag
gaccgcatcaccaagaacatgaaactggcggcaagcttgctctctccggtagcttttggc
tttgggacagaatacctttcacggtatgaagagcaaggtttgggcctgcagtggaacaac
attcagaccagcccattagagaaagacacttactccttcctcacctccatcctcatgatg
gtgtttgattccatcctctatggaatcctggcctggtatctggacaacgtgttcccagga
caatacggcatcggtcgaccgttctacttccctctccagccctcctactggcagaaacct
gcaccgatgtaccaagaaatgaccgaacaagattccaagaaaccagaagcagagatccag
gagctggacgttgagagcagaggcacgcccgagacttttacctgcaacggctcggccagc
aagaaaacctgcaagcaccaaagtaagagagagcgcctggagagagaaagggagctgctg
aaacaacaacaagaaaatccgaaccaggaggaggaggatctgaatgctgggagtgaaggt
ccggtgttctttgagcaggatcccctgggcctggtgttgggggtgcagatccaggatctg
gtcaaggtgtatgacgggagctctcgtcccgctgtgaactgcctcaacatctgtttctac
gaagggcagatcacatccttcctggggcacaatggggctggaaaaacaacaacactgtcc
attcttactggtctctatcctcccacatccggcacagcctacgtcaatggaagagacatt
aagacagacatagacatcatccgtacatctatgggcatgtgccctcaatacaacatcctc
ttcaatcacctcacagtggaggagcacatcctgttctactcactgctgaagggtcggact
ccagatgaggctcagacagaggtggagaacatgctgttggaccttggcctacctcacaag
cgagacgaagaggctcagaacctttcaggcggtatgcaaaggaagttgtctgttgccatg
gcgtttgtcggaggatccaaggttgtcattctggatgagcccacctcaggagtggacccg
tattccagaagatccatttgggatctcctgctgaaatacagaacaggccgcaccgtgatt
ctgtctacgcatcacatggacgaggccgacctgctgagtgaccgaatcgccatcatctcc
aaaggacagctttactgctgcgggtccccccttttcctcaaaaactgctttggagtcggc
ttttatctaacactcgtacgccgcatgaaggacatcaggaagcgagagaacgaatgcgat
tgtgcttcggactgctcgtgttcctgctccatctgcaccaaatacaaagatcagtctcag
aatcagcaccagcagctagacagagttctggagggggacatcgacaacatcaccagcctg
atccaccatcacgttcccgaggcaaagctcattgagaccatcggacaagagttgacctat
ttgctccctaataaagggttcaaacatcgagcctatgccagcctgtttagagagctggag
gaaactcttgctgatatgggtctgagcagctttggcatctctgatacgtccttagaggag
atatttctaaaggtcacagcagatggagaagcagcaaataatgccaccactgctgaacag
tggatgttgcagggaagacaaaatggcagcaaagttggtgtagaccaagaggaagagaat
aacggtgtaaatgggattacgtctgacagcagtgcagggaagggatccagacaggtgaag
ggcttttcactgatcctgaagcatttccatgctttgctagtgaagagattccatcacgcc
acgagaagcagaaaagacttcctggcacagattgtgcttcctgccacttttgtccttatt
tctctgatcttcacgttgattgtccctccatttggagaatatcccagcctaactctgacg
ccctggatgtacggacaacagttcaccttcttcagcaacgagcgtccgtttgaccccaga
atgaagcatttcacagatcgcttgttaagcatgccgggccttggcacacgatgcatgcta
agagagctgccagagatgatgtgcaacaccagtgcctctgactgggagcaacctgccgtc
tcccctgtggttcacaacatattacagagtcctgaatggaaccagcgcaacccgtcgcct
tcctgccagtgcagcaccagcaagaagctgaccatgatgcccatctgtcctgctggggct
ggaggcttgccccctcggcagcgggtggaggtcacgggagacatcatgctggatctgacc
gagcggaacatctctgactatctggtgaaaacctaccccggtctcatcagaaccagctta
aagagcaaatactgggtgaatgaacaaaggtatggaggcctctccataggaggtcaactt
cccatcctagatgtggatcctagagatatccagaatgttttccgtcagctaggacggatg
ctcaacataacggggggtcattactccagacttgccctgagggagatcggcacgttctta
cacttcatggagagcgagtttaatgtaaaggtgtggtataacaacaaaggctggcacgcc
atggtggtcttcatgaatgtggccaataacgccattctgcgagccttcctgccttctttc
gccaaaccagtcgagtatgggatcaccgccatcaatcaccctctgaatctcaccaaagag
cagctttctgaagtcactgtgttgaccacttcggtggacgccgttgtagcgatctgtgtc
attttcgccatgtccttcatccctgccagcttcgtcctttacctcattcaggagcgagtg
accaaagccaagcacctgcagtttgtcagtggcgtgagtccttgtgtgtactgggtggcc
aacttcttctgggacatggtgaactacattctcagcactgcaatggtggttggcattttt
atggcatttgataaaaagtgttacacatcaccgactaacctcccagcattaatagctctt
cttcttctttatgggtggtcagtgacacccatgatgtaccccatgtcctacgtattcagc
atcccaagcactgcgtatgtgtctctgtcctgcatcaatctctttattggcatcaacagc
agcgccatcacattcatcctggaactctttgaaaacaatcggtctctgctgacgtttaac
gagtggctgaagaaattgctgctggtgtttcctcacttctgcctggggcgaggactgata
gacatggccatgaatcaggctgtaactgatgtctacgccaggtttggtgaagaatacaaa
atggatccttttcggtgggactttgtgggaaaaaacatattttttatgctagtggaaggc
ttcgtgtactttagtctcaaccttttgatccagtatcggttctttttggaccactggtta
tcagactgtaaacagactgtagtacaaaatgaggatgaggatgtcgcagaggaaaggcta
aggatatatgagggtggaagcaagaaggacattctgcagatcagagacctctcaaagacg
tatgcgggcagaaagagggcagctgtggaccggatttgtgtgggagtccctgcaggcgag
tgtttcggccttctgggagttaatggagccgggaagacgacaactttcaaaatgctgact
ggtgacactgatgccagctctggagaggccactgtggctggttacaacatcctgacagag
atactagacgtgcaccagaacatgggctactgcccccagtttgatgccattgatgagctt
cttaccggcagggagcatctctacctttacgcccgactcagaggggtgcccgaatcagag
atccccagagtggcggagtggggcatccagaagttgggcctgacagaatacgctggctgc
agcgcaggaacttacagcggaggcaacaagcgtaaactgtccacagctattgcaatgatt
ggctgccctgcactggtcctgctggatgagccgacgaccgggatggatccgcactctcgc
cgctttctgtggaacgccatcatgagcgtgattcaggacggcagggctgtggtgctaacg
tcacacagcatggaggagtgtgaagctctatgcacccgactggccatcatggtcaacggc
accttcaagtgtcttggtaccatccagcacctcaaatacaaatttggcgacggctacgtt
gtgacgatgaaaatcaaggcagctaaagcagggttgtctccagaactggagcctgtggag
agctttatggagagctccttccccggctgtgttcagcgggagaaacactacaacacgctg
cagtatgaaattgcctcatcctccctggcgaggattttccagctggtggtggccaataaa
gacaggctcagcatcgaagactactctgtttcccagacaacactggaccaggtgtttgtc
aactttgccaagcaacagacgggagaggacgacgatgtgacgctgcacagacgaacagca
agaagagacatgaagatctcgcccgtgaagaggaagtaa
DBGET
integrated database retrieval system
