Poeciliopsis prolifica (blackstripe livebearer): 129378166
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Entry
129378166 CDS
T09758
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129378166 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129378166 (slx1b)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129378166 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-RING-like
T5orf172
FANCL_C
PHD_NSD
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
129378166
NCBI-ProteinID:
XP_054914423
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MMVVEVESFFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWE
MVLIIHNFPSDIAALRFEWAWQHPHSSRRLSHVSGRSKRETSLQFHWRVVSNMLRVAPWS
RLPLTARWLRQEYRMDFDPGLQPPLHIPIAFGSVRAKKKQLLPSADEDEDVMSVCFLCKA
MVKVSEKLSCFLPSCGMVSHVVCLARYFLRFESSHLMPVEGQCPSCHGSVLWGSLIRHKH
GCLGDLEEIVSSTSQSHWTDELQM
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgatggtagtggaggtggaaagcttcttcggtgtgtacatgctttactgcactaaccca
aaatttaaaggccgaatctacatcggtttcacggtcaaccctgagcggcggattggacaa
cacaacgccgggaggcacagagggggggccaaaagaaccagtggcagggggccatgggag
atggtactcatcatccacaacttcccttcagatatcgctgctctgaggtttgagtgggcg
tggcagcaccctcactcttccagacgactttcccacgtttccggacgttccaaaagagaa
acgagcctgcagttccactggcgagtcgtctccaacatgctgcgggtggcgccatggagc
agactgcctctgactgcccgctggctcagacaggagtataggatggactttgaccccggc
ctgcagcccccactgcacatccccatcgccttcggcagcgtgagggccaagaagaagcag
ttgctgccatctgcagatgaagatgaagatgtgatgtctgtgtgcttcctttgcaaagcg
atggtaaaggtgtcagagaagctgagctgtttccttccatcctgtggaatggtcagtcat
gtagtctgcctggccagatatttcctgaggttcgagtcgtcccacctcatgcccgtagag
ggacagtgtccttcttgccatggctcggtgctgtgggggagcctcattcgccacaaacac
ggctgcctcggagacctggaggagatcgtgtcctccacatcacagagccactggacagat
gaactgcagatgtga
DBGET
integrated database retrieval system
