Poeciliopsis prolifica (blackstripe livebearer): 129378175
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Entry
129378175 CDS
T09758
Symbol
arhgef40
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129378175 (arhgef40)
Membrane trafficking [BR:
pprl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129378175 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
Spectrin
IQ_SEC7_PH
DHC_N2
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
129378175
NCBI-ProteinID:
XP_054914434
LinkDB
All DBs
Position
Unknown
AA seq
1735 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLA
LKCLAPGGRTVQEILVPESQHPLVFTSEWLHSINKERGHKREVGGGLDTCLVSTCDGVVR
VPWKEIVYPKFLHDPSEELGLGSNRLSSEGGSSLGGWGGSSSGDMDSWSWDDEDDDSLPP
NCMDSDPAIRRRRSEDGLGRTARQPQMDGDYVELLEPRGGPDGGVDTKQRYLEMHGICKT
RTLPLCRRGKAIKLRKGKAWGYAKPERSGSFRGAYSTKEKEANPKDDLPLPKPPTTVSGS
ARVRQSYSSSAHDSDEGDKTSRDNNSLESRSPYFDVPLKERRPGVGKERDSNGFPQQSRD
GHQNKDSQRSDSLIANEIYDISHKSGHDVEGQSDHGSHSDSVFEDTDKPLSGDSDAVTPT
SDAPERLFTGVSESKNTANVQSKTRNSSKPKIPDERAEGRTEDRVCPRGKEVKTAGFRAP
RRKRKGKGAKGKARSGGKNQKGTKLQGKSPLPSPTAHSATTKLLIPEEKKAEETEKIDKP
DGEPTTDTKGKENARKGSGDDGSLPVCNGQSGTSSFNHLTVEAGSPEMCPDQINGVASKE
LALLRELDAELLQSGKLQLTGTVDRLGRALVFTDAGASEEEFCSEEVARVLSCYHRITRP
EAKEKGLTVLIDSRCSQPSCLCLSALKRFQVLVPGGLGSVLVLVEEQQESLSLALDGTET
HIVRGTGVLQQYVDSQQLPKQLDGDFSHSHSDWLAFRLRLEKLTERCESALSLLGEALQS
METEEMPNDIKAVPQSIDKHRQLMASVLADQRLTELQQRGGAWLAGLTNCSSGLAQRSPD
CRSALNATSQLYDGVDDALHRLVQVSNRRGRDLEALGRLAGMVDKLEKCDKEIEQVQSQL
EEYKDPPLSLSRLSLKQQKFRTFRETANELHSDTLSVLSDLEGWCELNWAGLSDIQIRLP
PVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCDAVSSTPSSPTTSSSTCPLASLP
PIPPSRFQDARSLAMELGGGALLDLWTQTVERYQRTVAQVKPRFLHSERTQTHGQGKAKT
PSGSTFWDLVGPDGEGDWGLGGGDGGLQSWGSLASLFRPQTCSTLKIGEDKGNRRDGSAG
NGGGAGGAGGGKFLQNLLNPGKKSPPEAPLPPKPPRKRHPSFDLQALLAPRKGTATPKPE
SPVGGASRSSPMSWLGRKNMADPVIATGMAAALPGWGVGVAGGGGGGVLIRGVEVSSKEV
VDHTGSPRQHVLLGRTERDVGADRTGSTAQSKLYLLWCRMLSSERQYVAVLKGVEETYLP
LLELSDTPASIRGKGDALFPSWRSLSAFHSRDLLPAMEGALVQSLLQQDCFSKYREEFLQ
YSHYIRSKPEMDSPLVTQAADFFKSKLPQASPLSPLSFPYCLQAPIQRLEQYCEALEELG
GLNLASDSALSVLRHAQRHGEDLRASDLIVGCPISVADRGDLVRQGELTVCGGPRRKRAG
VRNVFLYQHAIIFTKQKSPSPGRTVYSYKHSIKMSEMGLTQNVGDEGVKFEVWVRQAPRT
RDCITLQAPDRAGRESWAHDIAHLLWTHAINNTELCLKESLCMGVSSKLLLDATGTPGSE
LDSICSLSDRVHSSCSDSSSVGSQKEGGSPASGRDPRSSSGSTSYSQGHSPSTAV
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcaatggaggactgcgtgcagggggcgctctcgtcactttacccgccg
ttcgagagcacggcgccgcccctcctctctcaggtcttctcggtcctggagtcaacctat
caacacgatagcctgcgctacctcctggactatttcgtacctgccaagcatctcctgcac
aagctccagcagcatgcctgttctcagtatttgggatgcttgttccttcactccggctgg
cccctctgcctgggagagaaagtggttgttcagctctccaccttggattggaggctcctg
cgcagcaatgacttctacctgcaggtggtgcccttttctactcgctgcccacgactggcc
ctaaaatgtctggcacccgggggtcgcaccgtgcaagaaatcttggtgcctgagtcacag
catcccctggtgttcacctctgagtggctccacagtatcaacaaagaacggggtcacaag
agagaagttggagggggactcgacacctgtttggtcagcacctgcgacggcgtggtacga
gtcccgtggaaggaaatagtctacccaaaattcctccatgacccttctgaggagcttggc
ctgggttccaaccgcctttccagtgaggggggcagcagcctcggagggtggggtggctcc
tcctcaggagacatggactcctggtcctgggatgatgaagacgatgacagtctaccacca
aactgcatggactctgaccctgccatcagacggcggcgcagcgaagacggccttgggcgg
actgcgaggcagcctcagatggatggggattatgtggagcttttggagcccagaggagga
cctgatggaggcgttgataccaagcagaggtacttggagatgcacgggatttgtaagacc
agaactttgcccttatgcaggagaggtaaggccatcaaacttcgcaaaggaaaagcttgg
ggttatgcaaaacctgaaagatcgggaagctttcggggtgcctatagtaccaaggagaag
gaggcaaatccgaaagatgacttgccactgccaaagcctccaacaacagtttcaggatct
gccagagtaagacagtcttactcctcctctgctcatgactcagatgaaggagataaaaca
agcagagacaacaatagcttggaaagccgcagcccttattttgatgttccattaaaagaa
aggagacccggtgtgggcaaggaaagagacagcaacgggttcccacaacaatcccgagat
ggacaccaaaataaagactcccagagaagcgacagcttaatagcaaacgaaatctacgac
ataagccataaaagtggccatgacgttgagggccaatcggatcatggctcacattcagac
tctgtgtttgaggacacagataaaccactgagtggagacagcgatgctgttacgccaaca
tcggatgcaccagagagactgtttactggagtttctgaaagcaaaaatacagccaacgtt
cagtctaagacgaggaactcatcgaagccgaagattccagatgaaagggctgaagggcgg
acagaggacagagtgtgtcccagaggaaaagaagttaaaacagccggattcagagctcca
cggaggaaacggaagggaaagggcgccaaaggaaaggctaggtctggtggcaaaaaccaa
aaaggcacaaaactacagggtaaaagtcctctgccaagtcccacagcccactctgcaact
acaaagctgctaatcccagaggaaaagaaggcagaggaaacagaaaagattgacaaacct
gatggagagcccacaaccgacaccaaagggaaggaaaacgcaaggaaaggcagtggcgac
gatggatcgttgcctgtgtgcaatggtcagtcaggcacgtcttcatttaaccacttgact
gtggaggccggatcaccggagatgtgtcctgaccagataaacggtgttgcctctaaagag
ctggcgctgttaagggaactggatgcagaattacttcagtcagggaagctgcagctgaca
ggtacagtggacagattggggcgagctctggttttcaccgatgcaggtgcgtctgaggag
gagttctgctcggaggaggtcgcgcgggtcctttcctgttaccaccggatcactcggccc
gaagccaaagaaaagggactaactgtgctaatagacagcagatgctcccagccatcttgt
ctttgcctttctgctcttaaacggttccaggtcttggttcctggtggtctgggatccgtg
ttggtcctggtggaggagcagcaggagtccctttccttagctttagatgggacagagacc
cacatagtgcgtggaacaggagtccttcagcaatatgtggacagtcagcaactccctaag
cagctagatggagacttcagtcacagtcactcagactggttggcattcagactgaggttg
gagaaactgacagagcgctgcgagagcgccctctctctgctcggagaagccctgcagtcc
atggagacggaggagatgccgaatgacatcaaggctgttcctcagagcatcgacaaacac
aggcagctcatggcgagtgtgctggctgaccaacgcttaactgaactgcaacagaggggc
ggagcctggctagcggggctgacgaactgttcgtccggactggcgcagaggtcgcctgac
tgcaggtctgctctcaatgccacttcgcaactctacgacggcgtggacgatgccctccat
cggctcgtccaggtttccaaccggcgaggtcgtgatctggaagcactgggacgactggcg
ggaatggtggacaaactggaaaagtgtgacaaggagatagagcaagtgcagtcgcagctg
gaggaatacaaggaccctcctctgtctctcagcaggctgtcgctgaagcagcagaagttc
agaacgttcagagaaacggccaacgagctgcacagcgacactctgtcggtgctcagcgat
ctagagggctggtgcgagctgaactgggccggcctcagcgacatacagatccgtctaccc
cctgtgagggagaagctgagagacatgtcccactgtctgtccgactgctggaccactctg
gacaacacccagaggctgctgtccacgctgacagaggcgacccagtggtgcgacgcggtc
tcctccaccccgtcctcccccaccacctcctcttccacctgcccgctggcgtcccttcct
ccaatccccccgtctcgcttccaggacgcacggtccttagccatggagctgggaggcggg
gccctcctggacctctggacccaaacagtggagcgctaccagcggaccgtggcgcaggtc
aaacctcgtttcctccactccgagcggacgcagacccacggccaggggaaggccaagaca
ccgtccggcagcaccttctgggacctggtggggcccgacggggagggcgactgggggctc
ggaggaggggacgggggcctgcagtcctggggctccctggcgtcgctgttcaggcctcaa
acctgctccacgctgaagataggagaggacaaagggaaccggagggacgggtcagcaggg
aatggaggtggagcgggaggagccgggggagggaagttcctgcagaacctcctgaatcct
gggaagaaaagtcccccagaggccccgctgcctcccaagccccccaggaagcgccacccc
agctttgacctccaggctctcctggccccccgcaaaggcaccgccactcccaagccggag
tcccccgtcggcggggcgagccgctcctcgcccatgtcttggctggggcgaaagaacatg
gcggaccccgtcatcgccaccggcatggcggcggctcttcccgggtggggcgtcggagta
gcaggcggaggtggaggcggtgtgctgatccgaggtgtcgaggtcagcagcaaagaagtg
gtggatcacacggggtcgccgcggcaacacgtcctgctcgggaggacggagagggacgtg
ggggcagacaggaccggttcaactgcacagagtaaactgtacctgctctggtgcaggatg
ctgagctcagagcggcagtacgtcgccgtcctgaagggagttgaagagacgtacctgccc
ctgctggagctctccgacaccccggcctccatcagggggaagggagacgcgctcttcccc
agctggcgcagcctcagtgcctttcactcgcgggacctgctccctgccatggagggcgct
cttgtgcagagtttgttgcaacaggactgcttcagcaaatatcgggaggaatttctccag
tattcccactacattcgctctaaaccggaaatggattcacctctggtcacacaggcagct
gacttctttaagtccaaactcccccaggcgtcccccctgtcccctctgtccttcccttac
tgcctgcaggctcccattcagaggctggagcagtactgcgaggccctggaggagctgggg
ggtttaaatctggcctcagactccgccctctccgtcctgagacacgcccagcgccatggc
gaggacctcagggccagtgacctcatcgtcggctgtccgatctccgtggccgatcgcggc
gacctggtgaggcagggtgagctcaccgtgtgcgggggacctcggaggaagcgcgcgggt
gtcaggaatgtcttcctctaccagcacgccatcatcttcaccaagcagaagagcccaagt
ccgggtcgcaccgtctacagctacaagcacagcatcaagatgagtgaaatgggtctaact
cagaatgtcggcgatgagggagtgaagtttgaagtctgggtccgacaggcacccaggacc
agagactgtatcacccttcaggccccggatagagcaggaagggagtcctgggctcatgac
atagcccatctgctgtggacacatgccataaacaacacagagttgtgtctgaaggagtcg
ctgtgcatgggagtttccagtaagcttctgctggacgctacaggaactccgggatcagag
ctggactccatctgcagcctcagcgacagagtccacagtagctgctcagactcgtcctct
gtgggcagccagaaggaggggggatccccggcgtccgggagggaccccaggtcaagctcc
ggatcaacaagctattcacagggtcattctccctctacagctgtgtga
DBGET
integrated database retrieval system
