KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129378566
Entry
129378566         CDS       T09758                                 
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain
  KO
K06236  collagen type I alpha
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510  Focal adhesion
pprl04512  ECM-receptor interaction
pprl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129378566 (col1a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129378566 (col1a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129378566 (col1a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pprl00536]
    129378566 (col1a2)
Glycosaminoglycan binding proteins [BR:pprl00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   129378566 (col1a2)
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 129378566
NCBI-ProteinID: XP_054914852
LinkDB
Position
Unknown
AA seq 1355 aa
MLSFVDTRILLLLAVTLYLTSCQCNLKKGPRGDKGPRGDRGFPGPNGKDGKPGLPGPPGP
PGPPGLGGNFAAQYDGAKAPDPGPGPPGLMGPRGSPGMPGPQGPQGQTGHAGEPGQPGND
GPVGARGPPGPPGKSGEDGNNGRPGKPGDRGAAGPQGARGFPGTPGLPGMKGHRGYTGID
GRKGEPGSAGAKGESGASGSPGSPGLAGQRGQPGERGRPGPAGPSGARGSDGNVGPAGPA
GPLGAAGPPGFPGGPGPKGEIGAAGGTGPSGPQGSRGEPGPNGVVGPIGPPGNPGANGLN
GAKGAAGTPGVAGAPGFPGPRGGPGPQGPQGAAGPRGLSGDPGPQGVKGDTGGKGEPGNA
GPQGPPGTQGEEGKRGPTGEIGANGPAGSRGARGAPGSRGLPGSDGRTGPIGMPGARGAT
GAAGPRGPPGDAGRAGEPGPAGLRGLPGSPGSSGPPGKEGPSGPAGQDGRSGPPGPTGPR
GQPGNIGFPGPKGPSGEPGKPGEKGPSGPTGLRGPPGPDGNNGATGPMGVAGGPGEKGEQ
GPAGAPGFQGLPGPAGSVGEAGKPGERGIPGEQGAAGPAGGKGERGNPGAAGASGAQGPI
GPRGPAGAPGPDGGKGEPGAAGAAGAAGHQGSAGIPGERGVAGAPGGKGEKGETGHRGPD
GNPGRDGARGPAGPPGPPGPTGANGDKGEAGSFGPSGPAGPRGPSGERGEVGPAGAPGFA
GPPGLDGQTGARGERGPGGAKGEAGTAGPAGPAGQSGPAGPSGPAGPPGARGETGPPGLT
GLPGAAGRVGAPGPAGIVGPPGPSGNAGKDGPRGLRGDPGPAGPSGEQGMVGPPGPPGEK
GPSGESGPAGLQGTPGPSGPLGITGFVGLPGARGDRGPPGGAGAVGEPGRPGPSGPSGAR
GPPGNIGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGFKGDRGEPGSPGALGLAGAPGPA
GPTGAAGRPGNRGEAGPSGPSGPAGPAGARGAPGPAGPRGEKGVAGDKGDRGMKGLRGHP
GLQGMPGPSGPPGESGPAGALGHAGPRGPSGPNGPPGKDGRSGTHGPMGPPGSRGPPGYV
GPVGPPGSPGLPGPPGPSGGGYDVSGYDEYRADQPALRAKDYEVDATIKSLNTQIDNLLT
PEGSRKNPARTCRDIKLSHPDWSSGFYWIDPNQGCINDAIKVFCDFTTRETCIYAHPESI
ARKNWYRSTDNRKHVWFGETINGGTEFTYNDETLSPQSMATQLAFMRLLSNQASQNITYH
CKNSVAYMDGESGNLKKAVVLQGSNDVELRAEGNSRFTFSVLEDGCTTHTGEWSKTVIEY
RTNKPTRLPILDIAPLDIGGPDQEFGLDIGPVCFK
NT seq 4068 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatactcggattctgttgctgcttgcagtaacattatacctaaca
tcatgccaatgtaatttgaaaaaaggtcccagaggagacaaaggacctcgaggtgacagg
ggcttccctggccctaatggaaaagatggcaaacctggactccctggccctcctggcccc
ccaggcccccctggactcggaggaaactttgctgctcaatatgatggtgcgaaagccccc
gatcctggacccggacccccaggactgatgggacccagaggctcccctggaatgcctgga
ccccagggacctcaaggacagactggacacgctggtgagcccggacagcctggaaacgat
ggtcctgttggagcccgtggaccccctggaccacctggcaaatctggagaagatggaaac
aacggcagacctggcaagcccggagacagaggtgccgccggccctcagggcgctcgtgga
ttcccaggaactcctggtcttcccgggatgaagggacacagaggttacactggtattgat
ggacgtaagggagaacccggttctgctggcgccaagggtgagtctggtgcctcaggatct
cctggaagtcctggactggctggacaacgtggtcagcccggtgagagaggtcgccccggc
cctgctggcccttctggtgctcgtggttctgatggcaatgttggacctgctggccccgct
ggtcctttgggtgctgctggccccccaggctttcccggcggtcccggacccaagggagag
attggagctgctggaggcactggcccctctggacctcagggatctagaggagagcccgga
cccaatggtgttgtcggcccaattggtccccctggcaaccctggtgctaatggtctgaat
ggagccaagggagctgctggaacccccggtgttgctggagctcctggtttccccggacca
agaggaggacctggacctcagggacctcagggtgctgctggaccaagaggactttctggt
gatcctggacctcagggtgtcaagggagacactggtggcaaaggagagcctggtaacgct
ggccctcagggacctcctggaactcaaggtgaggagggcaagagaggacccactggtgag
attggtgctaatgggcctgctggtagccgtggtgctagaggtgctcccggaagccgtggt
ctgcctggttccgatggaagaactggcccaattggtatgcctggtgcccgcggtgctact
ggtgctgctggacctcgtggaccccctggagatgccggtcgtgctggcgagcctggccct
gccggtctcagaggtctcccaggaagccctggaagctctggacccccaggaaaggaggga
ccttctggtcctgctggacaagatggccgttctggacctcccggcccaactggacctaga
ggccagcccggaaacattggtttccccgggcccaaaggaccctctggagagcctggcaaa
cctggagagaaaggacctagtggccccactggtctgagaggaccccctggacctgatggc
aacaacggagccactggccccatgggagttgctggcggtcctggtgagaagggagagcag
ggaccagctggagctcctggcttccagggtctgcctggacctgctggatctgtcggtgag
gctggcaagcctggagaaagaggtatcccaggagagcagggagccgctgggccagctggt
ggcaagggagagcgtggtaacccaggtgctgctggagcttctggagctcagggaccaatt
ggaccccgtggaccagctggagcccctggacctgatggtggcaagggagagcctggagct
gctggagctgctggggctgccggacatcaaggatctgctggcatccccggtgagcgtggt
gtagccggtgctccaggaggcaagggagagaagggagagaccggccacagaggccctgat
ggaaatcctggcagagatggcgctcgtggccccgctggacctcctggccctcctggaccc
actggagccaacggtgataagggtgaggctggttcctttggaccttctggccctgctgga
cctcgtggaccctctggtgagcgtggagaggttggacctgccggagcccctggatttgct
ggaccccctggtcttgatggtcagaccggagccagaggagagcgaggacctggcggagct
aagggagaggctggaaccgctggccctgctggacccgccggacagtctggacctgctggc
ccatctggccctgctggacctcctggcgctcgtggagaaactggccctccaggtctgact
ggtttgcctggtgctgctggcagagttggtgctcccggccctgctggtattgtgggacct
cctggcccctccggtaacgctggcaaagacggacctcgtggtctccgtggtgaccctggt
cctgctggtccttctggtgagcagggaatggttggaccacctggtcctcctggagagaag
ggaccctctggagagtctggccctgctggacttcaaggtactcctggacccagtggacct
ctgggaattacaggattcgttggtctgcctggtgctagaggagatcgtggtccacctggt
ggtgctggtgctgtgggagagcctggtagacctggaccttctggtccatctggagcccgt
ggtccccctggtaacattggcatgcctggtatgaccggacctcaaggagaggctggacgc
gagggcagccctggtaacgatggaccccctggtcgtcccggtgccgctggattcaaggga
gaccgtggtgagcctggatctcctggtgccttgggacttgctggtgctcccggacctgcc
ggacctactggagctgctggcagacctggaaaccgtggagaggctggcccatcaggtcct
tccggacccgctggacccgctggagccagaggcgccccaggacctgctggaccccgtggt
gagaagggggttgctggagacaagggagacagaggcatgaagggtcttcgtggacatcct
ggtctccagggaatgcctggaccttctggacctcctggtgagagcggtcctgctggagcc
ctcggacatgctggacccagaggaccctctggacccaatggaccccctggtaaagatggt
agatctgggacacatggtccaatgggtcctcctggttcccgtggacctcctggatatgtt
ggaccagttggccctcctggatctcctggtctgcccggacctcctggcccatctggtggt
ggatatgacgtctccggatacgatgaatacagagctgatcagccagctctcagagccaag
gactacgaagttgatgccaccatcaagtctctcaacactcagatcgacaacctgcttacc
cccgagggatccagaaagaaccctgcccgcacctgccgtgacatcaagctcagccacccc
gactggagcagcggattctactggattgaccccaaccagggctgcatcaatgacgccatc
aaggtcttctgcgactttaccacccgcgagacctgcatctatgcccacccagagagcatt
gcacgcaagaactggtacagaagcacagacaacaggaagcacgtgtggttcggagagacc
atcaacggcggtaccgagtttacctacaacgacgagaccctcagcccacagagcatggcc
acgcagctggctttcatgcgcctgctttccaaccaggctagccagaacatcacctaccac
tgcaagaacagcgttgcctacatggatggtgagagcggcaacctgaagaaggccgttgtg
ctgcagggctccaacgatgtggagctcagagccgagggcaacagccgcttcaccttctcc
gtgctggaggatggctgcactacacacactggtgagtggagcaagacagtgattgagtac
agaacaaataaaccaactcgcctccccatcctcgacattgcacctttggacattggtgga
cctgatcaggagtttggtttggacattggcccagtctgtttcaaataa

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