Poeciliopsis prolifica (blackstripe livebearer): 129378871
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Entry
129378871 CDS
T09758
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129378871 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129378871 (drosha)
03009 Ribosome biogenesis [BR:
pprl03009
]
129378871 (drosha)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129378871 (drosha)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
129378871 (drosha)
Messenger RNA biogenesis [BR:
pprl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
129378871 (drosha)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
90S particles
RNase
129378871 (drosha)
Prokaryotic type
rRNA processing factors
129378871 (drosha)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
129378871 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
129378871
NCBI-ProteinID:
XP_054915342
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSFQPDRGGPRGQMPPGQNYLSSPPPQPPAPPYRYDPQTGSGYHGSAGYMPPHPDFMQYP
PPAPSQQNPGALSQCPLRPPFPKPPPNFPPPTLPSSAGGPTPGSQVSAQTSYPPYMMPPP
PLTHPTMPPPMSYHPPYTMNYPPFPPPPFNPGYTQTAGPFQPDHGVRHGGPYPYEKSADS
RRSPERGYRHDDHRQKSYGYGERHKMEFSGERKERGRSPDRRGRAEGVRYKADYDRGRSP
PRHRSRERSRERYRHRDVRRSQSPDRYRKRPRSRSTSRDRKRGRWEEEKERRSDSSSGPS
RERSYSSLRSRDSDEAFAERERDRQRDREKEKNDEEKEEEELLKPAWIRCTHAESFYSND
PMDQVGDSTVVGTSKLRDLYERFEDELIKRQERAKAARPKWEPPKTKLDEDPDDSSSESD
CESDGDGSSCSSSSDSDVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKAR
RTGIRHSIYPGEEPLKQCRPMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEG
FSLFSHTPLTNIPLCRVIRFNIDYTIHFIEEMTPENYCVRGLELFASYLFRDILELYDWN
LTGPDCDSESSGCQRFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKALVPEEEIADML
QWEQLDWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLS
YAGDPQYQKLWKSYVKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELS
SQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYVFKDRCLLQLAMTHPSHH
LNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRIN
HNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFML
YAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLDEARQLFGRLLFNTEDLREVWLHYPP
HPLQVQEPQSDRQLIETSPVLQKLTSFEDSIGVLFTHVRLLARAFTLRTVGFNHLTLGHN
QRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITN
DKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKS
QLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMG
AAMDALEKYNFPQMAHQKRFIERKYRQELKEMRRERERQEKETDDAAAAARK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccagccggaccgtgggggtccaaggggacagatgccccccggccagaactac
ctgagctctccccctccccagcctcctgctccaccctaccgttacgacccacagacaggt
tcgggttaccatggcagcgccggctacatgcccccgcaccctgacttcatgcagtaccct
cccccggctccgtcacagcagaaccctggcgctctgagtcagtgcccgctgcgcccacct
ttccccaaaccccctcccaatttcccgcctcccactttgcccagctcagcagggggtccg
actcccggctcccaggtgtctgctcagacctcctaccccccctacatgatgcctccgccc
ccactgactcacccaaccatgcctccgcccatgagctaccaccccccgtacaccatgaac
taccctcctttccctcctccgcctttcaaccccggctacacccagaccgccggccccttc
cagccggaccacggcgtgcgacatggggggccgtacccgtacgagaagtccgccgacagc
cggaggtcgccggaaagagggtatcgccatgacgaccacaggcagaagagctatggctac
ggcgagcggcacaaaatggagttcagcggagagaggaaggagcgcggcaggagtccggac
cggcgtgggagggcggagggggtgcgctacaaagctgactacgacagagggaggagtccg
ccgcgacaccggagccgggagaggagcagggagcggtaccgtcaccgagatgttcgccga
tcccagtcacccgatcgctacaggaagagaccgcgcagtcgctcaacgagccgagacagg
aagcgagggcgctgggaggaggagaaggagcggcggtccgacagctcgtcggggccgagc
cgggagcggagctactcgtccctccggagccgggactccgacgaggcgttcgccgagcgg
gagcgcgatcgacagcgggacagagagaaggagaagaacgacgaggagaaggaggaggaa
gagctgctgaaacccgcctggatccgctgcactcatgccgagagcttctactccaacgac
cccatggaccaagtgggcgactccacggtcgtgggaaccagcaaactgcgcgacctttac
gaacgcttcgaggacgaactcataaagaggcaggaacgagccaaagccgctcgacccaaa
tgggagccgcctaaaaccaaactggacgaggatccagacgacagcagcagcgagtcggac
tgcgagtcggacggcgacggcagcagctgctccagcagctccgactccgatgttttcgac
gtcatcgccgagatcaagaggaagaaggcgcatccggaccgtctgcatgaggagctgtgg
tacaacgacccgggccagatgaatgatggccccctgtgcaagtgcagcgccaaggccaga
cgaacggggatccgccacagcatctaccccggagaggagcctttgaagcaatgccgcccc
atgaacaacaacgccgggaaactgttccactacaggatcacggtgtctccgcccaccaac
ttcctgaccgaccggccgacagtgatcgagtacgacgaccacgagtatctgttcgaagga
ttctctctgttctcccacactcctctcaccaacattccattgtgccgagtgatccgcttc
aacatagattacaccattcacttcatagaggagatgacaccggagaactactgcgtccga
ggtctggagctgttcgcctcctacttgttccgggacattctggagctttacgactggaat
ctgacgggtcctgactgcgactctgagtcttctggatgccagcggttccatttcatgcct
cgtttcgtcagattcttaccggacggcgggaaggaggttctgtcgatgcaccaggtgctg
ctgtacctcctgcgcagcagcaaggcgctggttccagaggaggagatcgcagacatgctg
cagtgggagcagctggactggcagaaatatgcagaggagtgcaaaggcatgatcgtcacc
aaccctggcatgaaaccgagctcggtgcgcatcgaccagctggacagggagcagttcaac
ccagacgtcatcaccttccccatcatcgttcacttcggcatccggcccgctcagctcagc
tacgccggagacccccagtaccagaagctgtggaagagttatgtgaaactgcgccacctg
ctggcaaacagcccaaaggtcaagcagatcgacaagcagaagctgacacagagagaggaa
gctcttcagaagatccggcagaagaacacgatgcgccgtgaggtgactgtggagctcagc
agccagggcttctggaaaaccggcatccgctccgacgtctgccagcacgccatgatgctc
ccggttctcacccatcacatccgataccaccagtgcctgatgcacctggacaagctaatc
ggctacgtcttcaaggaccgctgcctcctgcagctggccatgactcatcccagtcaccac
ctcaactttggcatgaatcccgatcacgcccgcaactcgctgtccaactgcggcatccgc
caaccgaagtacggcgacaggaaggtccaccacatgtacatgaggaaaaaaggaatcaac
acactgattaacatcatgtcccgtctgggtcaggatgacccgtctccttccaggatcaat
cacaacgagaggctggagttcctgggcgacgctgttgtcgagttcctcaccagtgttcac
ctctactacctgttccccagtctggaggagggcggcctggccacctacaggacggccatc
gttcagaaccagcacttagccatgctggccaagaagctggagttggatcgcttcatgctc
tacgcccatggacccgacctgtgccgggagtcggaccttcgacatgctatggccaactgc
tttgaagcgctcattggggccgtgtatctagagggaggcctggatgaggcccggcagctt
ttcggacgactgcttttcaacactgaggacctgcgggaggtctggctccactacccacct
caccccctgcaggtgcaggagccgcagtcggaccgtcagctgattgaaacgtctccagtt
cttcagaaactcaccagcttcgaggattcgatcggagtcttgttcacgcatgtccgactg
ttggccagagcgttcaccttgaggacagtcggcttcaaccacctcaccctaggccacaac
cagaggatggagttcctcggagactccatcatgcagctggtcgccaccgaatatctcttc
atccacttccctgaccaccatgaaggacacttaactcttctccgcagctcgttggtgaac
aaccggactcaggccaaagtggcagaagagctgggcatgcaggagttcgccatcaccaac
gacaaaaccaaacggcccgtcgcgcttcgcacaaagactctggctgacctgttggagtct
ttcatcgcggctctctacatcgacaaagacctggagtacgttcacaccttcatgaacgtc
tgctttttccctcggctgaaggagtttattttgaaccaggactggaacgaccccaaatct
cagctgcagcagtgctgtttgaccctgagaacggagggcaaggagcccgacatcccgctg
tacaagacgctgcagacggtcgggccgtcgcacgcccggacgtacacggtcgccgtctac
ttcaaaggagaacgcatcggctgcggcaaaggcccaagcatccaacaggctgaaatggga
gctgcgatggatgcgcttgaaaaatataacttcccacaaatggctcatcagaagcgcttc
atcgagcggaagtaccgtcaggagctgaaggagatgcggcgagagcgagagcggcaggag
aaggagacggacgacgccgcggcggcggccaggaagtga
DBGET
integrated database retrieval system
