Poeciliopsis prolifica (blackstripe livebearer): 129378909
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Entry
129378909 CDS
T09758
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129378909
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Major cadherins
129378909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
TAS2R
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
129378909
NCBI-ProteinID:
XP_054915386
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MGVQMYLPATVGSFLLPVTLCILTLLPQGILGKSGEEENTRSTALLQRVKRGWVWNQFFV
LEEYTGLEPLYIGKLHSDMDKGDGSIKYILTGEGAGTTFTIDDSTGDIHAIQRLDREVKS
QYVLRAQARNRLTDRPLEPESEFIVKIQDINDNEPKFLDGPYRATVPEMSRIGTSVIQLT
ATDADDPTYGNSARVVYSILEGQPYFSVDAKTGVVRVSLADMDRETRENYTILIQAKDMG
GQLGGLAGTTTVNITLSDVNDNPPVFDQRLYQMSVPESAPVGSVVGRIWAKDRDIGVNAE
MKYSIIDGDGRDTFDISTDATNLFGIITIKKPLNFENKPSYTLKVEGANTHLDPTFRHRG
PFKDVTIVHVSVEDVDEPPLFGSPSYYIELLEDAEIGTVVKTVSARDPDAANNTVRYSID
RSSDPEKFFYIEITSGTLMTVRSLDREEVGWHNITVLAMEMNNPTQIASVSVAVRVLDVN
DNPPSLSHYLETFVCENAKAGQLIQTVTAVDPDEPLGGQRFYYSLAPEAANNPNFTLRDN
QDNTAWILTRRGGWSQQDQTVFYLPIFVSDGEQPMQTSTSTLTIRVCSCDQEGNVMSCNA
EAYSLPASLSKGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEENVHENIVRYDDE
GGGEEDTEAFDIAAMWNPREVHHPLGKIRQDMMPEIESLSRYVPQPCVIGVGSGEDSNVH
GYVLAKLLEADLDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGTSNADHEYDYLNDWGPR
FKKLAEMYGVLETNTPPMW
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggggtccaaatgtatcttccagccactgtgggcagctttttgctccctgtgaccctt
tgcattttgacccttctgcctcaaggcatcctgggtaaatcaggagaagaggaaaatacc
agaagcactgcgctgctgcagagggtgaaaagaggatgggtgtggaatcaatttttcgtc
ttggaggagtacaccggactggagccgctttacattggaaagctccactcggacatggac
aaaggtgacggctccatcaagtacattctgacgggtgagggggcgggcaccaccttcacc
atcgacgacagcactggggacatccatgccatccagaggttggacagggaagtgaagtcg
cagtacgttctccgggctcaggcccgaaaccgcctcacagaccgacctctggagcctgaa
tcagagttcatcgtcaagatccaggacatcaacgacaacgagcccaagttcctggatggt
ccctaccgggccactgttccagaaatgtccagaataggaacgtctgtgatccagctcact
gccacagacgccgacgaccccacgtatggaaacagcgctcgtgtcgtctacagtatcctg
gaggggcagccatacttctctgtggacgcaaaaaccggtgtggtccgagtgtccttggca
gacatggaccgggagaccagggagaactacaccatcctgatccaggctaaagacatgggc
ggacagctgggggggctggcggggaccaccaccgtcaacatcacgctgagcgacgtcaac
gacaacccgcccgtgtttgaccagcggttgtatcagatgagcgtgccggagtcggccccc
gtgggctcggtggtgggccggatctgggccaaggacagggacattggggtcaacgcagag
atgaaatacagcatcatcgacggagacgggagggacacgtttgacatcagcacggacgcc
accaacctatttggcatcatcaccataaaaaagccgttaaactttgagaacaaaccaagc
tacaccctgaaggtggagggagccaacacccacctggacccgaccttccggcaccgcgga
cccttcaaggacgtcaccatcgttcacgtgagcgtggaggacgtggacgagcccccgctg
ttcggctcgccgtcgtactacattgagcttctggaagacgccgagatcgggacggtggtg
aagacggtgtcagcgcgagatcctgatgctgccaacaacacagtgagatactccatcgac
aggagcagcgaccccgaaaaattcttctacattgaaatcacttctgggacgttgatgacg
gtgcgttcgctggacagagaggaggtgggatggcacaacatcacagtcctggccatggag
atgaataaccccacgcagatcgcgagcgtgtctgtggctgtgagggtgctggacgtcaac
gacaatccaccgtcgctgtcgcattacttggagacgtttgtgtgtgaaaacgccaaagca
ggacagctgatccagaccgtgacggcggtggatccagacgaacctctggggggccaacgc
ttctactacagcttggctccggaggccgccaacaaccccaacttcacgctgagagacaac
caagacaacacggcgtggatcctgacgcgccgcggcggctggtcccagcaggaccagacc
gtcttctacctgcccatcttcgtgtccgatggcgagcagccgatgcagaccagcaccagt
actctgacaatccgggtgtgcagctgtgaccaggagggaaacgtcatgtcgtgcaacgcc
gaggcctacagcctgcctgccagcctcagcaaaggagcgctcattgctattctggcctgc
atcttcgtcctgctggtgatgattctcctcatgctttccctgcggacacatcgtaaaaag
ccctacctctgcgacgaggaggagaacgtgcatgagaacatcgttcgctacgacgacgaa
ggcggtggtgaggaggacactgaggcctttgacatcgccgccatgtggaacccccgggaa
gtgcaccaccctctcggcaagatacggcaggacatgatgccggagatcgagagcctgtcg
cgctacgtccctcagccgtgtgtgatcggcgtgggcagcggcgaggacagcaacgtccac
ggctacgtgctggcgaagctcctggaggccgacctggacccgtgcgcgccgccgtacgac
tccctgcagacgtacgcgtacgaaggcgaaggctcggtggccgagtcgctcagctcgctg
cagtcgggaacatcaaatgccgaccatgagtacgactacctgaacgactggggcccacgc
tttaaaaaactggcagagatgtatggagtgctggagacaaacacgcctcccatgtggtag
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