Poeciliopsis prolifica (blackstripe livebearer): 129379020
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Entry
129379020 CDS
T09758
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129379020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129379020
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129379020
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129379020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
PRY
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
AAR2
Motif
Other DBs
NCBI-GeneID:
129379020
NCBI-ProteinID:
XP_054915533
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLAGPHSGPNSPIEEGSNRLAL
VPVSAAMSSPETPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDVLIDIIQQRRQII
GSKIKEGKTQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDTIS
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQD
RFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAIGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPQLRRVGVLLDYDAGYVAFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLEPGN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgtccaatctgcctggagctctttgaagacccg
ctgctgctcccttgtgcccacagcctgtgctttggctgtgcccatcgcatcctcgtctcc
cactgcgccaccaacgaatccgtccagagcattggcgcttttcagtgccccacttgtagg
tatgtcatttccctgagtccggagcgtggattagaaggactcaagagaaacgtgaccttg
caaaacattatcgatagagttcaacgggcctcatcctcagctggccttcctctgccattg
gccggtccccacagtgggcccaactctcccattgaggaagggagcaaccggctggctctg
gttcccgtcagtgccgccatgtccagcccagaaactccgccggaaccagttcaatgccag
ttctgcgagcaggacccaccccaggatgccgttaagacgtgcgtgacatgcgaagtgtcg
tactgcgaggagtgcctcagggcaactcacccgaacaagaaaccattcaccggtcaccgg
ctcattgagccaatgcccgattctcacctcagagggctccagtgcctggagcatgaggag
gagaaggtgaacatgtactgtgtcactgatgaccagctgatctgctcactgtgcaaactg
gttgggaggcacagggatcaccaagtggcagccctaagcgaccgctacgaaaaattaaag
caagcacttgactccaacctgagcaacttgatcaagaggaacaacgagctagagtcgctt
atggggaagctgatacagacttgtcaacatgtcgaggtaaatgcatcacgccaggagggc
aagctcatggaggagtgcgacgtcctgattgacatcatccagcagaggcggcagatcatt
ggcagcaagattaaagaggggaagactcaaaggcttcggaagctggcccagcagatttcc
aactgcaagcagtgcatcgagagatcctcggccctcatcacacaggccgatcagacgctg
aaggaaacggatcacgctcgcttcctgcagacggccaagagcatcaatgaaagggtttcc
atggcaacagcatcaacccaggtgctgattccagagatccacctgacagacacctttgac
acgtttgctctggatttcaccagagagaaaaagttgctggagaatctggattaccttaca
gctccaagcgctccatgcataagggaagagttgtgcacagcttcctatgatacaatcagt
gtccactggacatctgatgatgaattcacagtcgtgtcctatgagctgcagtacgccatc
ttcaccggacagtccaacatcgccagtctatgtaactcattagaaagttggatgattgtt
ccaaacatcaagcaaaaccactacacagtgcatggtttgcagagcggcaccaaatacatt
tttgttgtcaaggccattaatcaagcaggaagtagaagcagtgagccggggactctaaaa
accaacagccagccattcaaactggatccgaaatctgctcacaagaagctcaaggtttcc
catgataacctaacagtggagcgggacgaaaccacgtccaagaaaggccacagtcaggat
cggttctccagccagagcagctacggcgtggtaggaaatgtctacatcgacagtgggcgt
cactattgggaggctctcattggaggaagtacatggtacgctataggcattgcctacaag
tccgctcccaagcacgaatggattggcaagaactcggcttcttgggtgctctgccgctgc
aacaactcctgggtggttcgtcacaacagcaaggagctggccatcgaaccctcaccacaa
ctgcggcgggtcggagtcttgctggattatgatgccggatatgtggctttttatgacgca
gttggttctcaacacttacacacctttcacgtctccttcgtccagcctgtgtgtcccgtg
tttaatgtatggaataagtgtctgacgatactcactggtctccctatacccgaccatcta
gagggactagaacctggtaactaa
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