Poeciliopsis prolifica (blackstripe livebearer): 129379045
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Entry
129379045 CDS
T09758
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129379045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprl02000
]
129379045
Transporters [BR:
pprl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129379045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129379045
NCBI-ProteinID:
XP_054915575
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MRTRGVCVSLPEPMMADQPLSPPSDQPLTKFPHAGLPRKKEALGDGLQARGQWASKAEFL
LAVAGQIIGLGNVWRFPYLCYKNGGGVFFVPYLLFLVLCGVPLFLLETSLGQFTSLGGVS
AWRTICPLFGGLGYASQVMILHGCVYYIVILAWALFYLFYSFQAELPWSHCNNTWNTDAC
FLFDKYNQTANVTSLPVNATSPVMEFWEREVLRLSGTLDELGPVSWKLALCLAVVWLVCY
FCVWKGVKSTGKVVYLTATFPYIMLLVLLVRGATLPGATQGIIYYLKPNITRLADPQVWM
DAGTQIFFSYGICLGSLTALGSYNKYNNDCYKDSFMLCLLNSSTSFLAGFAIFSVLGFMA
EEQGVDIGAVAQSGPGLAFIAYPRAVAMMPVPQLWAVCFFLMIIMLGLDTQFVSLEALMT
SVTDLYPHVIRRGYRRELLLLLVCVVCFLIGLVMVTPGGLFVFQIYDHFSCSGASLLLLS
IFQSLAIGWVYGAERFSGNIRDMTGYSPLPVFKLCWKYLTPAVCTATFIFSLVRWSPLSL
GKGLVAPVWATTLGWILTLSSVSLLPIWAVYALVTTPGSLPQRFHRLCTPAEKSSMAFQH
LSTNGSALTYSPVVSLGGNQQIIELLPEKKT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgaggggtgtgtgtgtgtccctgccagaaccgatgatggccgaccagcctctc
tcgccgccatccgaccagccgctgacaaagttcccccacgccggcctccccaggaagaaa
gaagccctgggagacggcctgcaggccaggggccagtgggccagcaaggccgagttcctc
ctggcggtggccgggcaaatcattgggctgggcaacgtctggaggtttccctacctctgc
tataaaaacggaggaggtgtgttttttgtcccctacctgctgttcctggtgctgtgtggc
gtccccctgttcctcctggagacctctctgggtcagttcaccagcttgggaggggtcagt
gcctggagaaccatttgccccttatttggaggtctcggctatgctagccaggtgatgatt
ctgcacggttgcgtctactacatcgtcatcctggcctgggccctcttctacctgttctac
agcttccaggccgagttgccgtggtcgcactgcaacaacacgtggaacacggacgcgtgc
ttcttgttcgataaatacaaccagactgcaaacgtgaccagcttgcctgtgaacgccacc
tccccggtcatggagttctgggaacgggaagtgctccgcctgtcaggaactttagatgag
ctgggcccggtcagctggaagctggctctgtgtctggccgtcgtctggctcgtctgctac
ttttgtgtctggaagggcgtgaagtccaccggaaaggtggtgtacctgacggccaccttc
ccatacatcatgctgcttgtgctgctggtgcgcggtgccacgctgcctggagcgacccag
ggcatcatttactacctcaaacccaacatcacccgcctggctgaccctcaggtatggatg
gatgctggtacccagatatttttctcttatggaatctgcttgggaagtctcacagccttg
ggcagttacaacaaatacaacaatgactgctataaggactccttcatgctgtgcctcctg
aacagcagcaccagcttcctggccggtttcgccatcttctctgttctgggcttcatggct
gaagaacaaggcgttgacataggcgccgtggctcagtcaggacccggtcttgccttcatc
gcctacccgagagccgtcgccatgatgccggttcctcagctctgggccgtctgcttcttc
ctcatgatcatcatgctgggtctcgacacgcagtttgtgagcctggaggctctcatgact
tcggtgacggacctgtatccccacgtgatccggcgcggataccgcagagagctgctgctg
ctgctggtgtgcgttgtttgcttcctgattgggctggttatggtcacaccgggtggtctc
tttgtgttccagatctatgaccacttttcctgcagtggagccagcttgctgcttctctcc
atcttccagtctctggccatcggctgggtctacggagccgagcgtttcagtggcaacatc
agagatatgacgggctacagccccctgcctgtcttcaagctgtgctggaagtacctgact
ccagccgtgtgcactgctaccttcattttctccctggtgcgttggtctccgctgagcctg
gggaaaggactggtggctccggtctgggccaccacgctcggctggatcctgaccctgtcc
tcggtttccctgctccccatctgggccgtgtacgcgctggtcaccactccgggatctctg
ccgcagcgcttccatcgcctctgcacccctgcagagaagtcgtctatggccttccagcac
ctctccaccaacggctcggcgctgacctacagccccgtggtgtctctcggcgggaatcag
caaattatagagctcctcccagaaaagaagacatga
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