Poeciliopsis prolifica (blackstripe livebearer): 129379089
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Entry
129379089 CDS
T09758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
pprl04082
Neuroactive ligand signaling
pprl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129379089
04082 Neuroactive ligand signaling
129379089
04519 Cadherin signaling
129379089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129379089
Ion channels [BR:
pprl04040
]
Ligand-gated channels
GABA-A
129379089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129379089
NCBI-ProteinID:
XP_054915646
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MDPHSALNMTWLVLSLLLLLGCHKSFCQQSSEAQKEEDANEDSTVFTRILDSLLDGYDNR
LRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNNL
LASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPMD
AHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLIGQTADTEDIRTSRGQ
YTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTL
SISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKALEAQHPK
KRDPMVLSKKANNVCSAGVNYTPNLTKDVSISTISNTTSVQLRGSESKLVDPKKTYNSVS
KIDKMSRIVFPVLFGTFNLVYWATYLNREPMVKGVVAST
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcattcagctcttaacatgacttggcttgtactttccctcctgctcctgctc
ggatgccacaaaagtttttgtcagcagtcgtcggaagctcaaaaagaggaggacgccaac
gaggacagcacggttttcaccaggatcctggacagcctcctggacggctacgacaacagg
ctccgcccgggactcggagagaatgtgacggaaatcaagacgaacatctttgtcaccagc
ttcggtcctgtgtctgacacagagatggaatacaccatagacgtgttctttcgtcaaagc
tggaaggatgagcgtctctgcttcaaaggccccatggagatgctccctttaaacaacctg
ctggctagcaacatctggactcctgataccttcttcctcaacggtaagaagtccatcgct
cacaacatgaccacacccaacaagctgctgagactgaaggacgatggaaccctgctctac
acaatgaggttgacgatctcagcagaatgccccatgcaactggaggacttccccatggac
gcccacgcctgcccactcaagtttggcagctatgcctatccagtatcggaggtggtctac
acatggactcaaggagctgctaagtctgttgttgtggcagaagatggttccagactcaac
cagtaccatctcattggacaaacagctgacacagaggacatacgcaccagcagaggacaa
tacactgtgatgatggcacacttctacctgaagaggaagatcggatattttgtcatccag
acgtacatgccatgtttcatgactgtaatcctgtcccaagtgtcgttttggctcaacaga
gagtccgtccccgcgcggactgtgtttggggtgactacggtgctgactatgaccacactc
agcatcagcgctagaaactctcttcccaaagtagcctacgcaacagccatggactggttc
attgctgtctgctatgctttcgtcttttcagctcttatcgagtttgccacagtgaactac
ttcaccaaaaggagctgggcctgggatggcaagaaagctctggaagcacagcaccctaag
aaacgagacccaatggtgctctcaaaaaaggccaacaacgtttgctcggcaggcgtcaac
tacacccctaaccttaccaaggacgtgtccatctccaccatctccaatacgacgtcggtg
cagctgcggggctcagagagcaaactggtggaccccaaaaagacatacaacagcgtcagc
aagatcgacaagatgtcgcgaatagtgttccctgtcctcttcggaaccttcaacctcgtc
tactgggccacatacctgaacagagaaccgatggtgaaaggagttgtcgcttccacataa
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