Poeciliopsis prolifica (blackstripe livebearer): 129379156
Help
Entry
129379156 CDS
T09758
Symbol
rab5b
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04137
Mitophagy - animal
pprl04144
Endocytosis
pprl04145
Phagosome
pprl04148
Efferocytosis
pprl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129379156 (rab5b)
04145 Phagosome
129379156 (rab5b)
04137 Mitophagy - animal
129379156 (rab5b)
04148 Efferocytosis
129379156 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129379156 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129379156 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129379156 (rab5b)
04031 GTP-binding proteins [BR:
pprl04031
]
129379156 (rab5b)
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
129379156 (rab5b)
Endosome - Lysosome transport
129379156 (rab5b)
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129379156 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
129379156 (rab5b)
Exosomal proteins of colorectal cancer cells
129379156 (rab5b)
Exosomal proteins of melanoma cells
129379156 (rab5b)
GTP-binding proteins [BR:
pprl04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
129379156 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
129379156
NCBI-ProteinID:
XP_054915764
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MEPVIGINLTKVKVFPFAQRKTPEEYKDQASPSXLLGRPLGSLFQLHSREEAAPQPSPAQ
VGMSSRGSGSRSNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAF
LAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKE
LQRQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAI
AKKMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgttattggaattaacttaacaaaagttaaagtttttccttttgcacaaaga
aaaacaccagaagagtacaaagatcaagccagccccagcngtctacttgggaggccactc
gggtcactgttccagctgcattccagggaggaggccgccccccagccgtctcctgcacag
gtcggtatgagctccagagggagcggcagccgatccaacggctcgctaccacagaccaag
atctgccagttcaagctggtgctgctgggggacatggctgtgggcaagtccagcctggtg
ctacgcttcgtcaagggacagtttgacgagttccaggagacgactataggagctgcgttc
ttggctcagtcggtgtgtttagacgacaccacagtgaagtttgagatctgggacacagca
ggacaggagcgataccacagcctggctcccatgtactaccgcggcgctcaggctgccatc
gttgtctttgatatcactaaaccggagacctttgaaagagctaaagcctgggtgaaggag
ctgcagaggcaggccagtccaaacattgttatcgctctggccggaaacaaggctgacctt
gctgaaaagagacttgtagaatatgaggaagcccagacatatgctgaggacaccggtttg
ctgttcatggagacgtctgccaagacagccatgaacgtcaacgagcttttcttggctatt
gcaaaaaagatgccaaaaacagacacgcagaacccaacacatgcagcacgacatcgggga
gtgaacctgcaggatccagatgcccactccacccgagcctgctgcggtgggaactaa
DBGET
integrated database retrieval system
