Poeciliopsis prolifica (blackstripe livebearer): 129379190
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Entry
129379190 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-V-like
KO
K06487
integrin alpha V
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04081
Hormone signaling
pprl04145
Phagocytosis
pprl04148
Efferocytosis
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04518
Integrin signaling
pprl04810
Regulation of actin cytoskeleton
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129379190
04512 ECM-receptor interaction
129379190
04514 Cell adhesion molecule (CAM) interaction
129379190
04518 Integrin signaling
129379190
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129379190
04148 Efferocytosis
129379190
09144 Cellular community - eukaryotes
04510 Focal adhesion
129379190
09142 Cell motility
04820 Cytoskeleton in muscle cells
129379190
04810 Regulation of actin cytoskeleton
129379190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129379190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129379190
04515 Cell adhesion molecules [BR:
pprl04515
]
129379190
04090 CD molecules [BR:
pprl04090
]
129379190
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129379190
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129379190
Exosomal proteins of epithelial cells
129379190
Cell adhesion molecules [BR:
pprl04515
]
Integrins
Integrin alpha subunits
129379190
CD molecules [BR:
pprl04090
]
Proteins
129379190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
129379190
NCBI-ProteinID:
XP_054915814
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MLLAGGLVVNLSDFSSLEQALTTLPHIPRTQTVLASVRGSVKASRFFYQPKTSRSRATRT
GLPVTLTPRSLRCVRLGGFSWKPNLVHLTLYKACSPTAPVGNAEISQPPESAAVDGVTPR
GVSPQRPWPARTAVVGLLALLCASVHRGVAFNLDVDKPFVYTDPRGATSGSRSDVLIGAP
RANTSSSSTVVERGAVYSCPWKNSASCRQLLFDDKDNRFKDGNQIEFKSKQWFGASVRSD
GEHILACAPLYQWSTFGFSEREPVGTCYLKKGDTVVEYSPCRSSSHTPEGQGFCQAGFSA
DFLKKSNRVVVGGPGSFYWQGQLISDRVDEIXNRFNNDYITPYGNTLSTKSAGAQYDDSY
LGYSVTVGDFNEDGKEVTGVPRGDKALGYVNIFNGANMESMINFTGSQMAAYFGYSVAAS
DVNSDGFVDVLIGAPLFMDRGSDGKLREVGQVSVYLSRGGFSFQPPQLLTGAEVYARYGS
AIAAXGNLDRDGYKDVAISAPYGGPDHNGLVYIHNGQASGIDSTASQVLQGKWASSYMPA
SFGYSMTGSTDIDQNGYPDLVVGAFGADKAVLYRARPVISVNATLDISPQIINPEEKSCT
IPQTNTQVSCFKVKYCLAAGGFGAPSSLSFRVDLTLDRLKQKEATKRALFLHSATYQYSK
NMTVNSNRRLACEEQEVYLRDDREFRDKITPISVAMEYSLDYQLAADQTGLLPIVNIWAP
TNVTKQAHILLDCGEDNICKPDLKLSVKSDREKIYIGDDNALTLMVTAENKGEGAYEAEL
HVYPPQQADFTGVVRSQTLSRLSCAYKKENETKMVVCDLGNPMKKDTTILAELGFSVHQL
SEEDTSIKFDLQIVSSNQFQNRSPRVSSVTQLDILAKASIRGSSSPSQVLLPIANWKPKN
PPVLGDDIGPQILHVYELLNNGPSTFSKASLEVEWPYHFRNGSLLYITSFETEGPINCTT
DVEINPLNVSNPLGTQKNTSVVRDREMEGGNPRRVRKRDLEARETQNDLQILNCNTAECL
KLRCQVGRLERNKNAILFIYSRLDVNNFLRTENQNRSYVVRSTASFEVIEMPYKNLRTEL
PANSTTVSVSVTWVADSAQPVPGWVVALAVLAGLLLLALLIFIMYKLGFFKRVRPPQVDC
TEKEQLQPEENGNTDA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagccgggggtttagtcgttaatttgtctgactttagctcgttggaacaagct
ctgacaacacttccacacattcctcgtactcagacggtcttggcctcagttcggggctcg
gttaaggcgtccaggttcttttatcaaccaaaaacaagccgaagccgggcgacccgaacc
gggctccctgtgaccctcacgcctcgctcccttcgctgtgtgcggctcggcggcttcagc
tggaagccgaacctggttcatttgacgctctacaaggcttgttctccaactgctcccgtt
gggaacgctgagatttcccagcctcctgaaagtgccgctgttgacggcgtaacgccccgc
ggagtctcgccgcagcggccatggccggctcggacagctgtcgtcgggctgctcgcgctg
ctgtgcgcgagcgtccaccgcggcgtcgccttcaacctggacgtggacaaacccttcgtc
tacaccgaccccaggggagctacttcgggttctcgctccgacgttctcatcggagcgccc
cgggccaacacatcgtccagcagcaccgtggtggagaggggagctgtgtacagttgtccc
tggaagaactccgccagctgccggcagctgctgttcgacgacaaagataaccgatttaaa
gatgggaatcagatcgagtttaagtccaagcagtggtttggtgcctcagtgcgatctgac
ggagaacacatcctggcctgcgctcccctctaccagtggtccactttcggcttcagcgag
agggagcctgtggggacgtgttacctgaagaaaggagacacagtggtggagtactcaccc
tgcagatccagttcccacactccagaaggacagggtttctgccaggctggtttcagtgca
gactttcttaagaaaagtaacagagttgtggtgggaggaccgggcagcttctactggcag
ggccagttgatttcagaccgcgtcgacgagattnaaaatcgcttcaacaacgactacatc
acgccgtacggaaacacactttccaccaaatcagccggtgcccagtatgacgacagctac
ctcggatactctgtgacagtcggggatttcaacgaggatgggaaggaagtgactggagta
ccgaggggggacaaggcactgggttatgtgaacatcttcaatggggccaacatggagtcc
atgattaacttcaccggctcgcagatggctgcctactttggatattcagtggctgcctct
gatgttaacagcgacgggtttgtggacgtgctgatcggagctcccctcttcatggaccga
ggctcggatgggaaactgagggaggtgggacaggtgtccgtttacctgagccgaggcggc
ttctccttccagccgccgcagctgctgaccggagcggaggtttacgccagatacggctcg
gccatcgcagcgnnggggaacctggacagggacgggtacaaagacgtggccatctctgct
ccctacggaggtccggaccacaacggcctggtctacatccacaacggccaggcctcgggg
atcgactccacagcctctcaggtcctgcagggtaaatgggcgtccagctacatgcctgct
agctttggctattccatgacaggaagtacagacatagaccagaacggatatccagatttg
gtagttggagcgtttggagcggacaaggctgttttatacagagctcgtccagtgatcagt
gtgaacgctacgttagacataagcccccagatcatcaacccagaggagaagagctgcacc
attcctcaaaccaacacgcaggtgtcgtgttttaaagtgaagtactgtctggcagccggc
gggtttggagctccgtcctctctgagttttcgtgtggacctcacgctggaccgcctgaag
cagaaggaggcgaccaaacgcgccctcttcctccacagtgccacctatcagtattctaag
aacatgacggtgaacagcaacagacggctggcctgcgaggagcaggaagtctatttaagg
gacgaccgcgagtttcgggataagatcactcccatctccgtggcgatggagtacagtctg
gactaccagctggctgcagatcagaccggactgctgcccatcgtcaacatctgggcacca
actaacgtcaccaagcaggctcacattctgctggactgtggcgaagacaacatctgcaaa
cccgacctcaagctgtcggtgaagagcgaccgggagaagatctacatcggcgacgacaac
gccctcaccctgatggtcacggctgagaacaagggcgagggcgcctacgaggccgagctg
cacgtctacccgcctcaacaggccgacttcaccggggtggtccgcagtcagactctctct
cggctctcctgtgcttacaagaaggagaacgagaccaagatggtggtgtgtgacctggga
aaccccatgaagaaagacactacgatcctggcggagttgggattcagcgtacaccagctg
tctgaggaggacacctccatcaaattcgacctccagattgtcagctctaaccagtttcag
aacaggagtccccgagtgtccagcgtcacgcagctggacatcctggctaaagcctccatc
agagggtcgtcgtctccctctcaggttctgctgcccatcgccaactggaagcccaaaaac
cccccggtgctcggagacgacattgggccgcagattcttcacgtttacgagctgctgaac
aacgggcccagcacgttcagcaaggcgtcgctggaggtggaatggccgtatcacttcagg
aacggctctctgctctacatcaccagctttgagaccgaggggcccatcaactgcaccacg
gacgtggagatcaacccgctcaacgtctccaacccgctggggacccagaagaacaccagc
gtcgtcagggaccgagagatggagggaggaaacccgagacgtgtgaggaagagagacctg
gaggccagagagacgcaaaacgacttgcagatactgaactgcaacacagccgagtgtctg
aagctgaggtgtcaggtcggccgtctggagaggaacaagaacgccatcctgttcatctac
tccagactggatgtcaacaacttcctcaggactgagaatcagaatcgctcctacgtggtt
cgatcgacggcgtcgtttgaagtcattgagatgccgtacaagaacctgcggaccgagctg
ccggcgaactccaccaccgtcagcgtgtcggtgacgtgggtggcggactcggcccagccg
gtaccgggctgggtggtcgctctggcggtactcgcagggctcctgctgctggctttgctc
atcttcattatgtacaagctgggtttctttaagagagtgcgccccccgcaggtggactgc
accgagaaggagcagctgcagccagaggagaacgggaacactgacgcttag
DBGET
integrated database retrieval system
