Poeciliopsis prolifica (blackstripe livebearer): 129379225
Help
Entry
129379225 CDS
T09758
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04145
Phagosome
pprl04148
Efferocytosis
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04810
Regulation of actin cytoskeleton
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129379225 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129379225 (itgb5)
04148 Efferocytosis
129379225 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
129379225 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129379225 (itgb5)
04810 Regulation of actin cytoskeleton
129379225 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129379225 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129379225 (itgb5)
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129379225 (itgb5)
Cell adhesion molecules [BR:
pprl04515
]
Integrins
Integrin beta subunits
129379225 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
DUF2975
Motif
Other DBs
NCBI-GeneID:
129379225
NCBI-ProteinID:
XP_054915873
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MWSPGRAALCWMLLETFLRSAGGLNICMSGSATSCEECLLIHPSCAWCAQEDFGKRRSLT
SRCDLKQNLQKRGCEPRFTEYPRSTISILQNSPLSTKGSGPAQYDVVQIMPQRISLSLRP
GDQTAFSLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNFRLGFG
SFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQKQMVS
RNRDAPEGGFDAILQAAVCKEEIGWRKEASHLLVFATDDVPHLALDGRLGGLVQPHDGRC
HLNEHNEYSASTKMDYPSLALLGEKLAESNIFLIFAVTKRLYVIYKNFTALIPGTTVEIL
DQDSKNVIQLIITAYNNIRSKVELSVSDHPEDISLSFTATCQDGKPLPGFRKCADLKIGE
TVSFDVSVEARSCPPRGTDQTFTIKPVGFKDRLEVAVDYQCDCSCSRTAQVNSSLCNSIG
MYNCGTCRCEPGYLGAHCECQEGEASSMYLSACREAEGKQVCSGRGECSCNQCLCYESEF
GKIYGSFCECDDFSCARHKGVLCSGHGECHCGECKCHAGFVGDNCNCSTETSLCFSDDGK
MCSGRGSCVCGRCQCTEPGAFGETCEKCPTCPDACGTKRECIECRLFNSGRLADNETCQR
LCKDKIMTVESLENEDPAAVLCVYKTDNDCVMKFTYLEHASGRSILTALQEPECGGGPSA
LKVLLAVVGTILLVGVVLLATWKLVITIHDRREFARFQSARVRARYLMASNPLYKDPITT
HFAEVETFEKSFNGGVH
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccgggaagagccgctctgtgctggatgctgctggagacgttcctgcgctct
gctggaggtctcaacatctgtatgagcggcagcgccacgtcctgcgaagaatgcctcctg
atccaccccagctgcgcctggtgcgcacaagaggacttcgggaagcgccgctcactgacg
tcgcgatgcgacctcaagcaaaacttgcagaagcggggctgcgagccgcgcttcacagag
taccccaggagtacaatctccatcctgcagaactcaccgctgagcactaaaggatcgggg
ccagcccagtacgacgtggtgcagatcatgccccagaggatctccctcagcctgcggcca
ggagaccagacggcgttcagcctgcaggtgcggcaggtggaggattacccggtggacctc
tactacctgatggatctctcgctgtccatgaaagacgacctggacaccatccgtaacctg
ggcaccaagctggcggaggaaatggggaagctgaccagcaactttcgtctgggctttggc
tccttcgtggataaaaacatgtcgcccttctcctacacggcccccaagtaccaggagaac
ccctgcaacggatacaagctcttcccaaattgcgtgcccacctttggttttcgccacatc
ctctctctgacggacaaagtggaccgtttcaacgaggaggtgcagaagcagatggtgtcc
cggaaccgagacgctccagagggcggcttcgacgccatcctgcaggccgccgtgtgcaag
gaggagatcggctggaggaaggaggcctcccacctgctggtgtttgccacggacgacgtg
ccgcacctggctctggacggccggctggggggcctggtccagcctcacgacggccgctgt
cacctcaacgaacacaatgagtacagcgcctccaccaagatggactatccatccctcgct
ctgctgggagagaaactggctgagagtaacatcttcctcatcttcgctgtgaccaaacgg
ctctacgttatttacaagaatttcacagctctcatacctggaaccacagttgagatcctg
gaccaggactcaaagaacgtcatccagctgatcatcaccgcctacaacaacatacggtcc
aaagtggagctgtctgtgtcggatcaccccgaagacatcagcctgtccttcactgccacc
tgccaggatgggaagccgctgccaggcttcaggaagtgtgcagacttgaagattggagaa
acggtgtcctttgatgtgagtgtggaagctcggagctgcccgccccgcggcactgaccag
accttcaccataaagccggtggggtttaaggaccgcctggaggtggctgtggactatcag
tgtgactgcagctgcagccggacggcgcaggtcaacagcagcctctgcaactccattggc
atgtataactgcggtacctgccggtgtgagccgggctacctgggtgcccactgcgagtgc
caggagggcgaggccagcagcatgtacctcagcgcctgccgggaagccgaaggcaagcag
gtctgcagtggccgtggcgagtgcagctgcaaccagtgcctctgctatgagtccgagttc
gggaagatctacggaagcttctgcgagtgcgacgacttctcctgcgccagacacaaaggc
gtcctctgctcaggtcatggagaatgccactgtggggagtgcaaatgccacgctggcttc
gtgggcgacaactgtaactgctccacagagacgtcgctctgcttctcggatgacgggaag
atgtgcagtgggcgagggagctgcgtgtgcggccgctgtcagtgcaccgagcctggggcg
tttggagagacctgcgagaaatgccccacctgccccgatgcctgcggcaccaaaagggag
tgtattgagtgtcggcttttcaactctggtagactcgcagacaatgagacctgccagcgc
ttgtgcaaggataaaattatgactgtggagagccttgaaaatgaggaccctgcagcggtg
ttgtgtgtgtataagacggacaacgactgtgtgatgaagttcacgtacctggagcacgcc
agcggacgctccatcctcaccgcactccaggagccggagtgtggaggtggtccgtctgcc
ttaaaggtcctactggctgtggtgggcactatcttactggtgggagtggttctgctggcc
acctggaaactggtcatcaccatacacgaccggagagagtttgcgcgcttccagagcgct
cgggtccgcgcccggtacctcatggcatccaaccctctgtacaaggaccccatcaccact
cactttgcagaagtggaaacatttgagaagtcttttaacggcggggtccactga
DBGET
integrated database retrieval system
