Poeciliopsis prolifica (blackstripe livebearer): 129379329
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Entry
129379329 CDS
T09758
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129379329 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129379329 (prpf38a)
Spliceosome [BR:
pprl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129379329 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
129379329 (prpf38a)
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
129379329
NCBI-ProteinID:
XP_054916028
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERVCDIILPRLQKRQVLEEAEMLDPR
VSALEEDLDEVESSEEEDEEEEKFERPPSPEPHRRGHRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSSPSPRRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKTPERSSKK
SHKKSRRGND
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgttaaagatgcaaacagcatccacggaaccaacccgcagtacctg
gtggagaaaatcatccggacccgaatctatgagtccaaatactggaaggaggaatgtttc
ggcctgaccgcggagctggtggtggacaaagccatggagctgaagtttgtgggaggagtt
tatggcgggaacatcaagccgactccgttcctctgcctcacgctgaagatgctccagatc
cagccggagaaagacatcatcgtggagttcatcaaaaacgaggattttaaatacgttcgt
ctgctgggagccatgtatatgaggctgaccggcaccgccgtggactgctacaagtacctg
gagccgctctacaacgactacaggaagatcaagagtcagaaccggaacggagagtttgag
ctgatgcatgttgacgagttcatcgatgagctgctccacgcagagagagtgtgtgacatc
atcctgccgcggcttcagaagaggcaggttctggaggaagccgagatgctggacccgcgg
gtcagcgctctggaggaagacctggacgaggtggagagcagcgaggaagaggacgaggaa
gaggagaagttcgagcggccgccgagcccggagccccacagacgtggtcaccgagacaac
gaccggcctcgccgctcgccgtcgcctcgctacagacgcagccgctctcctcgccggcgg
agccgatcgcccaagagacggagcagcccgtcgcctcgcagagagcgtcaccgcagcaag
agcccgcggcgccaccgcagccgctccagggaccggcggcaccgctccaaatcgcccggt
caccacagaagccacagacatcggagccactccaaaaccccggagcgaagctccaaaaag
agccacaagaagagccggagaggaaacgactga
DBGET
integrated database retrieval system