Poeciliopsis prolifica (blackstripe livebearer): 129379332
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Entry
129379332 CDS
T09758
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129379332 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Cadherin related
129379332 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
EGF
CADH_Y-type_LIR
Cadherin_pro
hEGF
Fibulin_C
Y_Y_Y
Laminin_G_3
GspA_SrpA_N
He_PIG
Motif
Other DBs
NCBI-GeneID:
129379332
NCBI-ProteinID:
XP_054916032
LinkDB
All DBs
Position
Unknown
AA seq
2942 aa
AA seq
DB search
MIWVTFLPFLMPCVTANRTSDPVPFFHGHVFENSSPGSRVNGLSVPLKRLNSRRLCGTAL
PGAAAAHYKLLGDGSEDFRVFAHHKRGHVLLKTTQTLDREERAEYALSLGLCCGQCAEGE
DASELVASIKVDVLDTNDHQPVFPSANMKLDLDDATALRAAICSLSARDGDSGKNAELIY
FAEPKNGSFYAVPKTGDILLVDSILGLEKPIKFQVFARDRGWPPRTSQGVSVEINPRQWP
AARSATPGPRQQVEAQARRSRSVTEEETPVLISVSEDAGIGSVVVNLNPVRFQSAAFELV
EPELESSPVSVSRDGGDVVIMRRLDRETEPLVEITVRVQDKRGLEWYLVRVELTVTDVND
NIPEWSMVPAPYLAVVSPDATAGSLVYKLIAQDGDEGLNGEVEYFLSDGGDGRFEVDRKS
GQIRTTGLPLQRDREYLLTVVAADGLGSRSAPAIISVVAGARPPQFTNASFIIAILENTP
EGQPFLVTPAVSFQKKPISYSLLINPSSLFSISADTGEISLTRTIDYESDQHRYLLLVRA
SEGQDSMSSAAEVRVVIVDENDCVPEFLQSIYSKDGVPETVTTATSLLQVSANDCDSGPN
ADLTYYTLSPDFIISPHGTIFPAGPLDYERPNHLYEFVVMAIDKGEVPRTGTTTVRIRMA
NVNDEAPEFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITYKINTGNDEGNFVIDSQK
GLIRLRSSPPPRLQGVEYVLNVTATDDNASGGPQALASTAQVIVGVDDVNNNKPVFEQCQ
QYRESTSVLENQPAGSFVLQVHAVDADEGSNGKVTYGFMHKDSTVPAFSIHPDTGVIVTA
RKFDRERQREYAVTVTATDQAADPLIGICQLNILILDQNDNSPKFENLRYEYFLREDTMI
GTSFLRVAAHDDDFGSNAAVTYTMSGEQPEYLRVNPLTGWVYVNQPISQRTYITREIVAT
DGGNKSSSVELAVTITNVKNQPPQWEKDTYSVVIPENTVRDTPVVIIKATSPLGDPRVTY
NLEDGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQNVAAVPLAAF
TTVYVNVTDVNDNVPFFTSSIYEASVTEGAESGTLIFQVSANDLDLGLNGKISYSLLEDR
SGDHKYFRIDSELGFIYSQAVFDRETKSSYLLEVQSVDGWESSRPGKHGQPNSDTAYVRV
FISDVNDNKPVFAQASYEVDVDEDADVGFAILTVSANDGDEGGNAKLRYQITSGNTGGVF
DVEPEVGTIFIAQPLDYEQNKRYKLHVLASDGKWEDYTTVTVNVVNKNDESPVFTVNEYY
GSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLD
REERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPVFPCALSCHGDVAENSAVGTS
VMEMTATDLDDSAVGQNAVLSYRIVGILDGTNAKLGGVPTISEMFTINPTTGTITVGLGG
LDREQVESYLLLVEARDGGGMTGTGTATVQITDVNDHAPRFIDHSCQARISENSEPNAQV
LELAAEDRDTGENAQLTFSVVAGDQEQKFYMVSHKQEQRGVLRLKKRLDYERHSEQKFNL
TVKVEDLDFSSFLHCMVEVEDYNDHTPVFIPHFLSLAPLPEDVSVGTSVARLVASDSDSG
QNREITYSLSEDSDPEGLFTIDQSGLLSVARPLDREKTAQHHLVVIATDHGMPALTGSAT
VQLPLLDVNDNGPEFEAAYSPVVFENVAGPQVVRLNQTSALLRAVDRDSPENGPPFHFTV
PPEYRYSNDFYLQDNLNGTSTLTALRTFDRERQKEFLLPIVMSDSGHPAKTVTSTLTVTI
GDQNDHAHMAGEKQISINSHRGRMPTTVLGKVYAPDPDDWDNKTYVFEGHMPSYFILNKR
TGFLIIKENTPPGTYQFQVRVSDGIWPDAVSTVIVYVRELRDEAIYNSASLRLTDITAKE
FMELRGKQRSRYELLVDFLSEMLSVPPGEVNIFSLMDVKERMLDVRFAVSAGLSFLQPEK
MHGYLAAHKQKLQSFLQVSVFQVRVDECPGSECTGSGGCTSVLEVRDAPTVVDCGTMSLV
SVMVESKAVCSCPGREQSHQPCASYPRNPCFNGGLCMDTQHGYRCQCPAQFEGPECQQNK
HSFHGNGYAWFPPMMPCFESHVSLEFITDVADGLLLYSGPLAQLQAWDHEDFMAIELIDG
TPTLKINHGSGTLVLQLPGNINVADRRWHRLDVRSNNKEVRFTLDRCSGAAVMEMEGLGS
WLTTEDHSSCEVMGVTPNTDRHLNTSQVLQLGGVNEDIPYIYPQLQHKHFTGCIRNLIVD
SKLYDLGSPADWQSSSPGCLTTDSSCVNMGFPACGHRGRCHGEWGSFSCQCVAGYTGQQC
EEVAPEYSFDGHSHLHYQLASALPARRTWIQVLVRTRKHSSIIVSLVSRDQSEYLRLEVF
QGLLCTFYNLGDGDYNLTLPSYRLDNGEWHEVSLDRHDNEMTLRLDGGGGKREVMGSQSR
SREIIIDPTAVMLGNSFPSESNKSFQGCIRDLRLNGRYMPLDSQPRDGVSQVSVQGLSVG
CSSDSCKKYHCKAPFTCVDLWRVHECRCPPGHMIRVNGTKKSCVYTLCATRPCHQGTCVA
QSPSKFTCHCPEGYRGRHCETTLAVYREEVGLSFSSLFAICICFMALLVLLLGIFFYTRW
RSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSV
QYCRSRALHHPPPAHHLHHHLLHQAPPVPASTAPLDPLSRTSSSTTLPPSAASTSSTATT
TTSLRRDVPPTRPPAQGQARPSQLARRSLSFSSQDLARYLCEIIRDADQHPDTGPFDSLQ
VFSTEGGGSPAGSLSSFSSAGLDGGSTGEGAGEARREETLGEWGPRFEKLRALYERAEAS
DL
NT seq
8829 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggtcacgtttttacccttcttgatgccttgcgtgaccgcgaacaggacatcg
gaccctgtgccgttttttcacgggcatgtgttcgagaactcgtctcccggctcgcgggtc
aacgggctcagcgtcccactgaagcgactcaactcgcgccggctgtgcggcaccgcgctg
cccggcgcggcggcagcgcactataaacttctgggagatgggagcgaggacttccgcgtc
tttgcacaccacaaacgagggcatgttctgctgaagacgacccagactctggaccgagag
gagcgggctgagtacgccctgagtctgggtctgtgctgcggacagtgcgcggaaggggag
gacgcgtccgaactcgtggcgtccatcaaggtggacgttctggacaccaacgaccaccag
cccgttttccccagcgccaacatgaagctggatttggacgatgccactgctctgcgcgcg
gcgatctgctcactgagcgcgcgggacggcgacagcggcaagaacgcggagctcatctac
ttcgccgagcccaaaaacggaagtttctacgcggtgcccaaaacaggggatatcctgctg
gtggactccatcctcggtctggagaagcccatcaagtttcaagtgtttgcgcgggaccgc
ggctggccaccccgcacgagtcaaggtgtttccgtggaaataaacccgcgacaatggccc
gccgcgcgctccgcgacccccggaccacggcagcaagttgaagcgcaagcgcggaggtcc
cgatcggtcacggaggaggaaacaccggttcttatcagcgtgtccgaggacgcggggatc
ggttctgtcgtggtgaatctgaacccggtgaggttccagtcggccgccttcgagctggtg
gagccggagctggagagctccccggtcagcgtgagccgggacggcggcgatgtggtcatc
atgcggaggctggaccgggagaccgaacctctggtggagatcaccgtcagggtgcaggac
aagagaggtttggagtggtacctggttagagtggagctgactgtgactgatgtaaacgac
aacatcccggaatggagcatggttcctgctccctaccttgcagtggtttccccagatgcg
actgcaggatcactggtttacaaactcattgctcaggatggagacgaaggtcttaatggt
gaagtggagtacttcctgtcagatggtggcgacggtcgatttgaagtggacaggaagagt
ggccagatacggacaacggggcttcctctgcagcgtgacagagagtacctgctgacggtg
gtagcagccgacgggctgggcagccgcagtgcccccgccatcatatccgtggtggctgga
gcccggccaccgcagtttactaatgcctccttcatcatcgctatactggaaaacacgccg
gaaggacagccgtttctggtgacacctgctgtgtctttccaaaagaaaccaatcagctat
agcctcctcatcaatcccagcagtctgttctccatctcagcagacacaggcgaaatcagc
ttgacccgcaccatcgattacgagagtgaccaacatcgttacttgcttctggtgcgggcc
agcgagggccaggacagcatgagcagtgcagcagaggtgcgagttgtcattgttgatgag
aacgactgcgtcccagaattcctgcagtcgatttacagcaaggacggcgttccggagacg
gttacaacggcaacctccttgttgcaagtgtcagccaacgactgtgactccggaccgaat
gccgacctgacctattacaccctgagtccagattttatcatatctcctcatgggactatt
ttcccagcgggacctctggactacgagagacccaatcacctgtatgagtttgtcgtcatg
gcaattgacaagggagaggtcccacggacggggacgacgacggtgcgaattaggatggcc
aacgtaaacgacgaggcacccgagttttcccaacatatataccggacgtttgtgtcagaa
gatgcggggcccaacacacttgttgccacagtgttggcaaaggatcctgatggggatggg
atcacgtacaaaatcaacacaggaaatgatgagggcaattttgtcattgacagccaaaaa
ggtttgatccggctgcgctccagcccgccgcctcgcctgcagggcgtggagtacgtcctc
aacgtcacggccacagacgacaacgcctcgggtgggccgcaggcgctggcctccaccgcg
caggtcatagtgggagtggacgacgtgaacaacaacaagcccgtctttgaacagtgtcag
cagtacagagagagcacatcggttctggagaaccagccagcggggtcgttcgttctgcag
gttcatgctgtggatgcagacgaaggctccaatgggaaggtcacatacggctttatgcac
aaagactctacagttcctgcattcagtatccaccctgatactggtgtgatcgtgactgcc
aggaaatttgatcgtgagcgtcagcgggaatatgcggtgactgtgactgccactgaccag
gcagccgaccccctgatcggcatctgtcagctcaatattctcatcctggaccagaacgac
aacagcccgaagtttgagaacctccgatatgagtacttccttcgtgaggatacaatgatc
ggaactagtttcctgcgggtggcagcccatgacgatgactttggcagcaatgcagccgtc
acatacaccatgtctggtgagcagccggagtacctcagggtcaacccgctgacgggctgg
gtgtacgtcaaccagcccatctctcagaggacatacatcaccagggagattgtagcaaca
gacggaggaaacaagagcagttcggtggaactggctgtcaccatcaccaatgtaaagaac
cagcctccacagtgggaaaaagacacttacagtgtggtgataccggagaacacagttcgg
gacacgcccgtcgtgatcatcaaagccacatcccctcttggtgatccaagggtaacgtac
aacttggaggatggaatggtcccagagaccaacatgccggttcgcttctacttgactccc
aatcgagaagatggttcagcctccattctggtggcggagcccctggactatgagaccacc
aggaactttattctgcgggttcgcgctcagaatgtggcagctgtaccattagctgccttc
accacagtctatgttaatgtcacagatgttaatgacaacgttccatttttcacttcctcc
atctatgaggcctcggtcactgaaggagcagaatcaggaactttgattttccaggtatca
gccaatgatcttgacctgggccttaatgggaagatttcctactcactgctggaggaccgc
agtggggaccacaagtatttccgcatcgactcggagctgggcttcatctactctcaggct
gtgtttgatagagagaccaaaagctcgtacttgttggaagttcagtctgtggatggctgg
gagtcttcacgaccaggaaagcatggacaacccaactctgacacagcatatgttcgcgtt
ttcatcagcgacgtgaacgataacaagcccgtgtttgcacaggcgtcttatgaagttgat
gtggatgaggacgctgacgtgggctttgccattctcacagttagtgccaatgatggggac
gaaggtgggaatgcgaagctgcgttaccagattacatcaggaaacacaggaggcgtgttt
gacgtggagccagaggtgggaaccatcttcatcgctcagcctctggactatgaacagaac
aaaagatacaagctgcatgtcctggcttcggatgggaagtgggaagattacacgacggtg
actgtgaacgtggtgaacaagaacgacgagtcgcccgtgttcacagtgaatgagtactac
ggcagcgtgaccgaggagctggacggttcgcctgtctttgtcctgcaggtaacagcgtct
gacccagataaggacgctgatcaggaggctctgcggtactccctccatggccagggtgct
gagagcgaattcataatcgatgaggtcactggcaagatctacgcccagaggacgctggac
cgcgaagaacgcgccgtctggcgcttcgtcgtcctggcaacagatgagggcggcgaaggc
ctgacgggttttacggacgttatcatcaacgtgtgggacatcaatgacaacgctcccgta
ttcccctgcgccctcagttgccacggagatgtagccgagaactctgctgtcgggacgtcc
gtcatggagatgactgccactgacctggacgattcagcagtgggacagaacgccgtgctc
tcctacaggattgtgggcatcttagatggcacaaatgccaaactgggaggagtgcccacc
atctcggaaatgttcaccatcaaccccaccacgggaaccatcactgtgggcttgggcggt
ctggacagagagcaggtggagtcctacctcctccttgtcgaggccagagatggaggaggc
atgacgggaactggaaccgcaaccgttcagattacggacgtcaacgaccacgctcccagg
ttcatcgatcactcctgtcaggcaaggatctctgaaaactcagagcccaacgcacaggtt
ctggagctggctgcagaggacagagacactggagaaaacgctcagctgaccttcagtgtt
gtggccggagatcaagagcagaagttctacatggtcagtcacaagcaggagcagcgtgga
gtcctgaggctgaagaagcgcttggactacgaacgacacagtgaacagaagttcaacctc
acggtgaaggtggaggatctggatttctccagctttctgcactgcatggtcgaggtggag
gactacaatgatcacactcctgtcttcattccacacttcctgtccctggcgccgctacca
gaggacgtcagcgtgggaaccagcgtggcccgtctggtggccagtgactcggactcgggc
cagaaccgcgaaatcacctacagcctgtcggaagactccgaccctgagggcctgttcacc
atcgaccagtccggcttactctcggtggcccggccgctggaccgagagaaaacagctcag
catcacttggttgtcatagcaacagatcacgggatgcctgctttgacaggcagcgccaca
gttcagctgcctctgttggatgttaacgataacgggccagagtttgaggccgcctactct
cctgtggtctttgagaatgtggctggtccacaggtagtgaggttgaaccaaacctcggct
ctcctccgagccgtggaccgggactctcccgagaacgggccgccctttcatttcaccgtc
ccaccggagtatcgctacagcaacgacttctacctgcaggacaacctgaacggcacgtcc
acgctgacggccctcaggacatttgaccgcgagcgccagaaggagtttctcctgcccatc
gtcatgagcgacagtggtcacccggccaaaacggtgaccagcaccctgactgtgaccatt
ggtgaccagaatgatcacgctcacatggcgggagagaagcagatatccatcaacagccac
agaggtcgcatgccaacaacagttcttgggaaggtctatgctcctgaccctgatgactgg
gataacaagacctacgtctttgagggacacatgccaagttacttcatcctgaacaagcgt
accgggttccttatcatcaaggagaacaccccacccggcacctaccagttccaggtccgt
gtgtctgatggaatttggcccgatgccgtctccacagtaattgtatacgtaagggagctg
cgagatgaagccatctacaactctgcatcccttcgcctcacagacatcactgccaaggag
ttcatggagctcagagggaagcagcgtagccgctacgagctgctggtggacttcctgtcg
gagatgctctccgtcccaccgggtgaagttaacatcttcagcctcatggacgtgaaggaa
cgaatgctggacgtccgctttgctgtgagcgccggtctctccttcctgcagccggagaaa
atgcacggctaccttgccgcccacaaacaaaagctccagtccttcctgcaggtcagcgtg
ttccaggtccgggtggacgagtgtcccggttcggagtgcaccggctccggcggctgtacc
agcgtgctggaggtgcgggacgcgcccacggtggtggactgcggcaccatgagcctggtt
tccgtcatggtggagtccaaggctgtgtgctcctgcccgggacgggagcagtcccatcag
ccctgcgcctcgtatcccagaaacccctgcttcaacggagggctgtgcatggacacgcag
cacggctacaggtgccagtgccccgctcagttcgagggacctgaatgccagcagaacaag
cacagtttccatggcaatggctatgcttggtttcctcctatgatgccttgttttgagagc
catgtgtcgctggagtttatcacagacgtggctgatggactgctgctgtacagcggccca
ctggcacagctgcaagcctgggaccacgaggacttcatggccatagagctaatagatggg
accccaaccttgaaaatcaaccatggctctggcacgcttgtgctacagctgccaggaaac
atcaacgtggcagacaggcgctggcatcggctggatgtccgtagcaacaacaaggaagta
cgtttcaccctggaccgatgttcaggagcggctgtgatggaaatggagggtctgggcagc
tggttgaccactgaggaccactcctcctgtgaagtgatgggtgttacacccaacactgac
agacacctaaacacaagtcaagttctccagcttggaggtgtaaacgaggacattccctac
atctaccctcagcttcaacacaaacacttcaccggctgcatccgcaacctcattgtggac
agcaagctgtatgatctgggctccccggccgactggcagtccagctccccaggctgcctc
accactgatagcagctgtgtcaacatgggctttccagcctgcggccatcgcggccgctgt
catggggagtggggctctttcagctgccagtgtgtggctggatacacgggacagcagtgt
gaagaagtggccccagagtattccttcgacggccacagtcatctgcattaccagctggcg
tccgcgctccctgccagaagaacgtggatccaagtcctggttcgaacccggaaacacagc
agcatcatcgtcagcctggtgtccagggaccagagtgaatacctgcgactggaggtattt
cagggccttctttgcactttctacaacctcggcgacggagactacaacctgaccctaccc
agctatcgccttgacaacggcgagtggcacgaggtctccttggacagacacgacaacgag
atgacgctgcggctggatggcggcggagggaagcgggaggtgatgggatcacagagcaga
agccgagaaatcatcatcgacccgaccgccgtgatgctggggaactccttcccctcggaa
agcaacaagagctttcaaggctgcatcagggatctacgcctcaacggccgttacatgcca
ctggacagccagccacgggacggggtttcccaggtcagcgtgcaagggctctccgtcgga
tgttcatcagactcctgcaaaaagtatcactgtaaagccccgtttacctgcgtggacttg
tggagagtgcacgaatgcaggtgtcctcctggtcacatgatccgtgtgaatggcaccaaa
aagtcctgtgtgtacacgctatgcgctacgcggccttgtcaccagggaacctgcgtggcc
cagtcaccctctaagttcacctgccactgtccggagggctacagagggcgccactgtgag
accacattagctgtttatcgagaggaggtgggcctcagcttcagctcgctctttgccatc
tgtatctgcttcatggcgttgctagtgctgctgctgggcattttcttctacacccgctgg
cggagctacaaaggtctgaaggagggcgtgtaccacgtgtcggcgcaccacgacggctgg
gaggacatccgggagaacgtgctcaactacgacgaggagggaggcggcgaggaggaccag
aacgcctacgacatggcggagctgcagaagtcccttcagccaagccccgcccagtcggtc
cagtactgccgctccagagcgctgcaccacccgccgcccgcccaccacctgcaccaccac
ctgctccaccaggctccgcccgtcccggcctccaccgcgccgctggaccccctcagccgg
acgtccagctccaccaccctgcctccctcggccgcctccacgtcctccacggccaccacc
accaccagcctccgtagggacgtgccccccacccggccccccgcccagggccaggcgcgc
ccctctcagctggcgcggcgctccctctccttctccagccaggacctggcccgttacctg
tgtgagatcatccgtgacgcagaccagcacccggacacggggcccttcgactccctgcag
gtgttctccaccgagggcggggggtcgcccgccggctccctcagctccttcagttcggcg
gggctggacggggggagcacaggggaaggggctggggaggctcggcgggaggagacgctt
ggggagtggggcccccgctttgagaaactgagagctctgtacgagcgagccgaggccagc
gacctctga
DBGET
integrated database retrieval system
