Poeciliopsis prolifica (blackstripe livebearer): 129379508
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Entry
129379508 CDS
T09758
Symbol
ntn5
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129379508 (ntn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129379508 (ntn5)
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Axon guidance molecules
129379508 (ntn5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
OTO1
Motif
Other DBs
NCBI-GeneID:
129379508
NCBI-ProteinID:
XP_054916290
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MLKCVRPAKSSSSAEQNTSHARQARCARVWTGPHLFSRLDDMMVRPSSLPPSISLIPVLL
RLVLLPPSLISSSFSNAPLSWTSPHEPCYHPDGRPRHCLSEFINAAYGVQVDVTHSLHGP
DNTPNITTLTDLHNPHNLTCWRARAGADSGDWVFTLPLGRRFEITYISLQFCSQGQPSDP
MSISILKSMDHGRTWRPMQHYSSNCLEDFKQPSLTIARTRHQETEPLCSDPRPLQRQRGS
TVLAFSTLDGRPSSPDFDYSPTLQDWVTATDIRVVFHRTSNNVKATEKMEETQWRDGLHD
TKRTGILKWRLDTKSDTGDQVDKLRDNTLAFFDKAKRKNSEISRRNKEEWIDKQRRKDHR
KGSGHGQDGHNVTSKEGEDAFGTSDFLASPKKGGKTRKRNRNKEDNFWVPCSNGDCTWTV
EGRSRTNGGRELRKRRNNNPNTKQNLRTSQPSGLILPVRAPLAISDLQVGGRCKCNGHAS
RCRRDDAGQAVCVCEHHTAGPDCDMCEDFYVDRPWHRATPTHPNPCVACECNGHSNKCRF
SMEVFQQSGRKSGGVCLKCRHHTAGRHCQYCQNGFTRDTSKPLDHRKACQPCQCHPLGAV
GRWCNQTSGQCLCREGVTGLRCNRCALGYKQGKSPLRPCIRIQEAAPTPVYQPQYSIAEE
CVSYCQPSEVKVRMNLETYCLKDYVLKVQVRGMERSGPWWQFSIAVQTVFRTGSKSRVRR
GSQSLWVPDRDLSCGCPALHVGRTFLLIGAEEGERSWAPEESRLVADRSTLALQWREHWS
PKLRGFRGQDKRGRCPQKSPNAHRPRSREHAKTHSAYIPPHLLTEKDPSPHFDKTVNLDE
APSSTERDMAPTETAPSSPTIALVCSTQNPRVK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatgtgttagaccggccaaatccagctcatctgccgagcagaacacgagtcac
gcacgtcaggcccgctgcgcccgagtgtggacaggtcctcatctgtttagcaggctcgat
gacatgatggtccgaccctcttcccttcccccctccatctccctcattcctgttctcctc
cgactcgtcctcctccctccgtctctcatctcctcttccttctccaacgccccgctgagc
tggacctcgcctcacgagccctgctatcacccagatggccgtcctcgacactgcctgtcg
gagttcatcaatgccgcgtacggagtccaagtcgatgtcacccactccctacatgggccc
gataacacccccaacatcaccaccctaacggacctgcacaacccgcacaacctgacctgc
tggagggctcgcgcaggagccgactctggcgactgggtcttcactttacctctgggccgc
cgctttgagatcacctacatcagcctgcagttctgcagccaaggacagccgtctgacccc
atgtccatctccatccttaagtccatggaccacgggcgtacctggcggccaatgcagcac
tactccagcaactgtctggaggacttcaaacaaccctcattgaccatcgcccgaacgaga
caccaagagacagagccgctctgttcggacccccggcccctgcagaggcagcggggaagc
acagtcctcgccttctccactctggatggtcgcccgtcttctcctgattttgattacagc
cccaccctccaggactgggtcacggccacggacatccgggttgtcttccacagaacttcc
aacaatgtcaaggctacggaaaaaatggaggaaacccagtggcgtgacggcctccatgac
accaaacgaactgggattctcaagtggagattggatacaaagagtgacactggagatcag
gtggacaaattaagagacaatacactggctttttttgacaaggccaaaagaaaaaactcg
gagatcagtaggaggaataaagaggagtggatagacaagcagcgtcggaaggaccatcgc
aaaggttctggtcacggccaagatggccacaatgtgaccagcaaggaaggagaagacgct
tttggcaccagcgactttctcgcttcgccaaagaaaggtggcaaaaccagaaagcgaaat
cgcaacaaggaagacaatttttgggtcccttgctcaaacggagactgcacttggacggtc
gaagggcggagcaggacgaacggtggccgggaactgaggaagaggaggaacaacaacccc
aacacaaaacagaacttgaggacttcccagccctctggcttgatacttcctgtccgagct
cctctggccatttccgacctgcaagtcggagggaggtgcaaatgcaacggacacgcttcc
aggtgtcgccgtgacgacgcaggtcaggcagtgtgtgtctgcgagcatcacacggcgggc
ccagactgtgacatgtgtgaggatttctatgttgataggccgtggcatcgcgcgacaccc
actcacccaaacccctgcgttgcctgtgagtgtaatggccactcaaacaaatgccgcttc
agcatggaggtgttccagcagtcgggcaggaagagcggaggcgtgtgcctgaagtgtcgc
caccacacggccgggcgccactgccagtactgccagaacggcttcacccgcgacaccagc
aagccgctcgaccaccgcaaggcctgccaaccatgccagtgccatcctctgggagccgtg
ggccgctggtgcaaccaaacgtcgggtcagtgtctgtgtcgagaaggagtgaccggcctc
aggtgtaaccgctgcgctctgggatacaagcagggcaagtcccctctgcggccctgcata
cgcattcaggaggccgctccaaccccggtgtaccaacctcagtacagcatcgcggaggag
tgtgtgtcctactgccagccctctgaggtcaaagtcaggatgaacctggagacgtattgt
ctcaaggactacgtgctgaaggtgcaggtgagagggatggagcgttcaggaccgtggtgg
cagttctccatcgctgtacaaaccgtcttccggacaggctctaagtcccgtgtccggagg
ggctcccagtccctctgggttcccgaccgcgacctcagctgcggttgccccgccctccac
gtgggccggacattcctcctcatcggcgcagaggaaggggagcggagttgggctccggaa
gagagtcgcctggtggcggaccgctccacactggccctccagtggcgggaacactggagc
cccaagctcaggggcttccgggggcaggacaagaggggccgctgcccccaaaaatcccca
aacgcccaccgcccccggagcagggagcacgcaaagacacattctgcatacatcccccct
cacctgctgacggagaaggaccccagccctcattttgacaaaactgtgaacttggatgag
gctccgagcagcacagagagagacatggcgcccacagagacagcaccctcttctcccacc
atcgctctggtgtgttccactcaaaacccccgagtaaaataa
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