Poeciliopsis prolifica (blackstripe livebearer): 129379533
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Entry
129379533 CDS
T09758
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129379533 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129379533 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129379533 (pcdh7b)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129379533 (pcdh7b)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129379533 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
Motif
Other DBs
NCBI-GeneID:
129379533
NCBI-ProteinID:
XP_054916332
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MGTTAAVDCLYYCMLILQLVHQPAASKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEV
TFTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWV
DLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQ
DNGENSRRLGSSGDSYSGKRRFEEGASRSSVFELQVADTIDGEKQPQLIIKGALDREQRD
SYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKNVYEADLPENSSPGAPILQLKA
ADADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQ
PSKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVMVDAPIALVQVSDRDQ
GENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGS
PSLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPESNAPGERVTTVKAVDADSGKNAEIAY
SLDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVGDK
NDNDPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETG
TIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTL
LPPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLMAKLEPKHY
GLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLSTSLNTNIAGDPNYD
LSKQRLSIVIGVVSGIMTVILIILVVVMARYCHPKNKNGYEAGKKDHEDFFTPQQHDKSK
KPKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDL
ARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSDYSTQTI
NKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPED
SYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECNEYGHSDSCWMPVRTSPERRPSK
STTNPQQQPKLSTFMTGNGSSGSSSSSGSAEQPGSQETLAMAAMANGDPTTTHMMGDRNR
NLLNKKMASSSSSYEAFGSPSYGSPGGGEETLGHPTEEIPLAPTGEYKPTSCGTLTRREV
YL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggggactactgcagcagtggactgtttgtactattgcatgctcatattgcagcttgtg
catcagcccgccgcgagtaagcaagtgctccggtaccgcttggcggaggagggacctgcc
gatgtcagagttggcaacgtagcaggcgacctgggcattgtggccgggtccggcgaggtg
acattcaccctggagtccggctcggattttttcaaaatagacaacataacaggtgagctc
accaccaacgagaggcggatagaccgtgagaaattgcagcagtgccaaatgatatttgac
gagaacgagtgcttcatagatttcgaggtgtccgtgattggaccagctcagagctgggtc
gacctctttgaggggaaagtcatcatattagatataaatgacaacactccatctttcccc
tcgcctgtcctgacactgtctgtggaggaaaacagacccattggaaccctttatctgctg
cccacagccacagacagagattttggcaggaatggaatagagagatatgagctaattcag
gacaatggggaaaactcaaggcgtttgggatcttctggggattcctactctggaaaaaga
cgatttgaggagggtgcgagcaggagcagtgtgtttgaactgcaagttgctgacaccatt
gatggagagaagcaaccccaactcatcattaaaggggcccttgacagagaacagagagac
tcttatgagctcaccttgcgggttagggacggaggagatcccccacgttcctctcaggcc
attctgagagtaatgatcactgatgtaaatgacaacaacccgcggtttgagaagaacgtg
tatgaagctgacctgccagaaaacagctcccctggagcaccaatactccaacttaaagca
gctgatgcagatgttggggttaatggtcaaattgaatatgtgtttggggcagccacagag
tctgtgagaaggctcctgaggttggatgagagcactggctggctaagtgtgttgcaccgc
attgaccgtgaagaagttagccaactgaggttcacagtaatggctcgtgaccgaggccag
ccgtccaaaatggataaggcaacagtggtgctgaatatcaaggacgagaacgacaatgtc
ccggcaattgaaatccgaaaaattgggcgcatttttctaaaagacggagtggcaaatgta
gctgaggatgtgatggttgacgcacccattgctttagttcaggtgtcagacagagaccaa
ggagagaacggcatagtaacctgcaccgtcgtaggagatgtaccctttcaacttaaacca
gccagtgagatggaaggtgaacagaataaaaaaaagtattttctccacacatctgcacca
ctggactatgaggccacacaggaatacaatgtggtaatagtggctgtggactctggaagc
cctagtctggcaagtaataactctcttatcgtcaaagtgggtgacactaacgacaatcct
cctatcttcagccagaatgtagttgaggtatccttccctgaaagcaatgcccctggcgag
agggtaacaacagtaaaagctgttgatgctgacagtgggaaaaatgctgaaatagcatat
tccctcgattcatctgtaaatgggattttctctattgatgcagacagtggagacatccga
gtaaacaccatcttggatagagagcaaacagagcgctatgaatttaaagtgatagctaaa
gataagggcataaacactctgcagggttctgctactgtggttgttctcgtgggggataaa
aatgacaatgatccaaagttcatgcaggatgtgttcaccttctatgttaaagagaatctt
gaccctaacagccctgttggtatggtcacagtaattgatgctgacaaaggccaaaatgca
gagatgggtcttttcattgaggaggaggaggaaatcttttctattgagaatgaaactggg
actattttttccaccctctccttcgaccgggagcaaaaaactacatacacattccgtgtc
aaagctgtggatggtggtgatccacccagatccgccaccgccacagtctcactcttcgtc
atggatgaaaacgacaatgcaccaacagtcaccttcccaataaacagctcctacaccctt
ctccctccctccagtaacatcaggacagttgtcagaactgtcatagccaccgacacggac
actggcatcaatgcagacctgaactacagcatcattgggggcaacccattcaagttattt
gagattgatgggggcacaggggtgatctcattgatggcaaagttggaaccaaaacactat
ggtctccacagacttgtggtccaagtgaatgacagtggtcagccttcacaaagcaccacc
accctggttcacgtgtatgttaatgagacactttccaattccacaattgtggaggcacag
gtggctaagagcctgagtacctccctgaacaccaatatcgctggtgaccccaactatgat
ctcagcaaacaacgattaagcattgtaattggagtagtttcgggcatcatgaccgtcatt
ctcatcattcttgttgttgtcatggcccgttattgccaccctaagaacaagaatggctat
gaggcaggaaagaaagatcatgaggacttttttacacctcagcagcatgacaaatccaag
aagcccaagaaagacaagaagaaacaaaagtccaaacagcctctttatagtagtattgtc
acagtagaggcctccaaacctaatgggcagcggtatgatggcgtcaatgagaagctttca
gacagccccggcatgggacgctaccgttcagtcaacggtgggccgggaagtccagacctg
gctcggcactacaagtccagttcaccgctcccaactgtccagcttcacccacagtcacca
acagctggaaaaaagcaccaggcagttcaggacctgccccctgccaacacctttgttggc
accggagataacatttccctgggatctgaccactgctctgactacagcactcaaaccatc
aacaagtacaacaaacagccgtttcgtcgagtgaccttctcggtggtgagccaaccccag
gaccctcaccagcagggatcgctgcagagctgctacgacagcggcctggatgaatccgag
acacccagcagcaagagttcttcgggcccccggctgggcgccctccccctgcccgaggac
agctacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgac
tcccggcccttgcctgacgtagccatgactggcaagtgcacccgggagtgcaacgagtac
ggccactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccgtccaag
tcaaccaccaacccccaacaacaaccaaagctttccactttcatgaccggcaatggcagc
agcgggagcagtagcagcagcggcagcgcggaacaacctggtagccaagagaccctcgcc
atggccgccatggccaatggagaccccaccaccacgcacatgatgggagaccgcaaccgc
aacttgctcaacaagaagatggcctcctcctcttcttcttacgaggccttcggctcgcct
tcctacggctcgccaggaggtggcgaggagacgctgggccacccaaccgaggagatcccc
ctcgcgccaaccggagagtacaagcccacgtcatgtggtactctgacgcgacgggaggtg
tacctgtaa
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integrated database retrieval system
