Poeciliopsis prolifica (blackstripe livebearer): 129379667
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Entry
129379667 CDS
T09758
Name
(RefSeq) cadherin-2-like isoform X1
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129379667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129379667
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129379667
04090 CD molecules [BR:
pprl04090
]
129379667
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129379667
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Major cadherins
129379667
CD molecules [BR:
pprl04090
]
Proteins
129379667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Stevor
CD34_antigen
DUF2254
DUF5385
Motif
Other DBs
NCBI-GeneID:
129379667
NCBI-ProteinID:
XP_054916432
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MNIIWVWTAMATVEVAVLAELSSSRQDRLPCTKGFSQEEYYTKTESKMAEGQAVFNVTFR
NCDKGNVQLKAANTSSFTVSQEGVVYTIQPLSLGVEEKVEVMIYAQDIQSNRMWHTRVHL
EINTAPEQVKPGDTALTISPVPEVLFPWHSLVVGGDGTIRRVKRDWVIPPINVPENSRGQ
FPEDLVRIRSDRDKNRMLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREHIPNFHL
RAHAVDLNGNQVENPIDIVINVIDQNDNRPEFTHTIFNGSVSEGSKPGSFVMTVTAVDKD
DPKMANGMLRYKILSQNPQSPSYNMFTINNRTGDIITVAAGLDREKVPQYTLIIQATDME
GNPTYGLSNTATTVIRIIDINDNPPEFTTDAFFGEVHENRVNVIVANLTVTDKDQPHTPA
WSTVYRIIAGDPTGHFSIPTDPTTNEGLITVVKPVDFELTRSYMLTVEAENEIPLARGIH
IPRQSTATVSVRILDINESPEFSPNPKTIKLEEGLPAGSLLTTFTAQDPDRFMRQTIRYS
KIYDPASWLDIDPVYGRISTIAILDRESTFVKNNLYNVTFTASDNGIPPATGTGTLQIHL
LDINDNAPNVFPPEVEMCEKPDANSLNITANDPDLTPNAGPFVFELASRPSDVRRNWTLS
RLNGESAQLHLRISSLASGIYELPVVITDSGNLPMSNTSFLRVKVCPCDRHGDCVDMEKM
IAAGLGTGAIISILICIIILLVLVLLFVMWMKRRDKERQAKQLLIDPEDDVRDNILKYDE
EGGGEEDQDYDLSQLQQPDALEPECVKVGIRRLDERPLHHDHQYPVRSAAPQPGDIGDFI
HEGLKAADHDPTAPPYDSLLVFDYEGSSSTAGSLSSLHSSSSCGDQDYDYLGDWGPRFRK
LADLYSGGDD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatttgggtgtggacggccatggcgactgtggaggttgctgttctggccgag
ctgtcgtcaagcaggcaggatcggttgccgtgcacaaagggcttttcacaagaggaatac
tacactaaaactgagtcaaagatggcagaagggcaggctgtgtttaacgtgacattcagg
aactgcgataagggaaatgtccaactgaaggctgcaaatacctcttccttcactgtgagt
caggaaggtgtggtctacaccatacaaccactgagcttgggagtggaggaaaaggttgaa
gtcatgatctatgctcaagacattcagtccaacagaatgtggcacaccagagttcatctt
gagatcaacactgcaccagaacaggtaaagcctggtgatacagcactgactatatcacca
gttccagaggtcctgtttccatggcatagcctggttgttggtggagatggcaccatcagg
cgggtaaagagggactgggtcattccacctatcaacgttcctgagaactcaagagggcaa
ttcccagaggatctagtcaggattcgttcagatcgggataagaaccggatgctgcgctac
agtgtgacaggtcctggtgctgaccaacctccaactggcatcttcatcatcaacccaatt
tcaggccagctgtccgtcaccaaacctctggacagagaacacatccctaacttccattta
cgtgcccatgctgtggatctgaatggcaaccaagtggagaaccccattgacatcgtcatc
aacgtcatcgaccagaacgataacagaccagagtttacacacaccatcttcaatggttct
gtttctgagggatctaaaccaggatcatttgtaatgacagtgacagcagtggataaggat
gacccaaaaatggccaatggaatgttgcggtacaagatactttcacagaatccccaaagc
ccgtcatacaatatgtttaccataaacaacaggactggtgacatcatcactgtagctgca
ggcctggatcgagagaaagtccctcagtacaccctgatcatccaggccactgacatggag
ggaaaccccacttacggcctttccaacactgccaccacggtcatcaggatcattgacatc
aacgacaaccctcctgaattcaccacagacgcattcttcggtgaagttcatgagaacagg
gtgaatgtaattgttgctaacctgaccgtgacagataaagaccagccacatacgccggcc
tggagcacagtgtacaggatcattgctggagaccccacaggacacttctcaatccccact
gaccccacgactaatgagggcttgatcactgtggtcaagccagtagattttgagttgacc
cgttcatacatgttaaccgtggaggcagaaaatgaaatcccattggcccgtggcatccac
atccctcgtcagtccacagcaactgtgtctgtgagaatcctggacatcaacgagagtcca
gagttcagtcccaaccccaagactattaaactggaagaaggtctgccagctggatctttg
ctcacaactttcactgcccaggatcctgaccgcttcatgaggcagactattagatactcc
aagatctatgacccagccagctggctggatattgacccagtatacggaaggatttccacc
atcgccatccttgatcgagagtctacctttgtcaagaacaacctctacaatgttactttc
acagcttctgataatggcattcctcctgccactggtacaggaacccttcagattcacctg
cttgacataaatgataatgcgcccaatgtgttccctcctgaagtggaaatgtgtgagaaa
ccagatgcaaactccttaaatatcacagccaatgaccccgacttgactcccaatgctgga
ccctttgtgtttgagctggcaagtcgtccatcagatgtacgtcgcaactggaccctcagt
cgcctgaatggcgagtccgcccagcttcacctgcggatcagttctcttgccagtggcatc
tatgagctccccgttgtgatcacagattctggcaatctgcctatgtctaacacatccttc
ctgagggtcaaggtctgtccctgtgatcgccatggagactgtgtggacatggagaaaatg
attgccgctggattgggcactggtgctattatctcgatcctcatctgtatcatcatacta
ttagtgctggtactcctctttgtgatgtggatgaagaggagggataaagagcgtcaggcc
aagcaacttctgatcgacccagaggacgatgtccgagacaacatcctcaaatatgatgag
gagggtggtggagaagaggatcaggactatgacctgagccaactgcaacagcctgatgcc
ctggagccagagtgtgtcaaagtggggatcagacgtctggatgagaggcccctccaccat
gaccaccagtaccccgtccgctctgctgcccctcaaccaggagacataggagatttcatc
catgagggcctgaaggctgcagaccatgaccccacagctcccccttacgactctctgttg
gtgtttgactatgaggggagcagttctactgctggctccctcagctccctgcactcttca
tcaagctgtggagaccaggattacgattacctcggcgactggggaccacgtttccgcaag
ctggccgacctgtacagtggaggagatgactag
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