Poeciliopsis prolifica (blackstripe livebearer): 129379722
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Entry
129379722 CDS
T09758
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030
DNA replication
pprl03410
Base excision repair
pprl03420
Nucleotide excision repair
pprl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129379722 (rfc4)
03410 Base excision repair
129379722 (rfc4)
03420 Nucleotide excision repair
129379722 (rfc4)
03430 Mismatch repair
129379722 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprl03032
]
129379722 (rfc4)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129379722 (rfc4)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129379722 (rfc4)
DNA replication proteins [BR:
pprl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129379722 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
129379722 (rfc4)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129379722 (rfc4)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129379722 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
129379722 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_22
AAA_30
AAA_16
AAA_11
DUF815
Mg_chelatase
SLFN-g3_helicase
AAA_19
RuvB_N
Gp44_lid
AAA_14
AAA_24
Cdc6_lid
AAA_28
AAA_5
wHTH-PRTase_assc
AAA_7
ResIII
Hydantoinase_B
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
129379722
NCBI-ProteinID:
XP_054916519
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQAFLKGTTIQTSRPQKDKVTAGPSAEKKANAVPWVEKYRPKCVDEVAFQDEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRSTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICDKEKLKYTKESIAALVQLSEGDLRKAITFL
QSAARLNADKEITDQAIIEIAGVVPSKMIDNLLQICFRGTFEKLEVAVRNMVNEGYAATQ
MLSQLHYCILEKDITDRQKSPIFEKMAVVEKCLADGADEYLQMLSLCSVIMQQAGQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctcaaaggaacaactatccagaccagcagaccccagaaggataaggtg
acagcgggacccagtgctgagaagaaggcgaacgctgttccctgggtggagaaatacaga
cccaaatgtgttgatgaggtggccttccaggacgaggtggtcgcagtgctgaagaagtca
ctggaaggagcagatcttccaaaccttctcttctacggtcctcctggaactggaaagact
tccaccatcctagctgctgctagagaactttatgggccagagctgtatcgacagagggtg
ctggagctgaatgcttcggatgaacgaggaatccaggtcatcagggagaaagtgaagaac
tttgctcagcttactgtggctgggacgcgtccagacggaaagccatgtcctccttttaag
atcatcatcctggacgaggcagactccatgacggctccagcccaagctgctctcagacgg
accatggagaaggagtcccgctccacccgcttttgcctcatctgtaactacatcagcagg
attattgagcctcttacctctagatgttctaagtttcgtttcaaacctctggccaatcaa
atccaagaagaacgtctgctggaaatctgtgataaggagaagctcaagtacaccaaagag
agcatcgcagcgttggtgcagctgtctgagggggatctgaggaaagccatcacatttctt
cagagtgcagcgcgtctcaacgctgacaaggaaatcactgaccaagctataattgagatc
gctggggtcgtcccttccaaaatgattgataatttgctccaaatctgcttcagaggaaca
tttgagaaactcgaggtcgcagtgaggaatatggtgaatgaaggatatgcagccacacag
atgctgagtcagctccattactgcatcttggaaaaggacattactgacaggcaaaagtca
cccatttttgaaaagatggcggttgtagaaaagtgccttgctgatggtgcagatgaatac
ctgcagatgctgagtttgtgttcagtgataatgcagcaggctggtcagagctga
DBGET
integrated database retrieval system
