Poeciliopsis prolifica (blackstripe livebearer): 129379739
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Entry
129379739 CDS
T09758
Symbol
crocc2
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129379739 (crocc2)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129379739 (crocc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
129379739
NCBI-ProteinID:
XP_054916546
LinkDB
All DBs
Position
Unknown
AA seq
1829 aa
AA seq
DB search
MSSRREQDGHSPRLEAVIQKLETTLLQSDSNSGDRSLILQGNVEESGATPIPIASHICQI
IAHNLAEQPAGESVEVSKQEESGTLKEHSSPSQMDDDQPLVKQTRLTERAHLDSAELQKR
VEQDLNIVIQKQTALLQEERSRSASLSQVNSVLREQLDQVDIVNKGLMESLRKAREDAQW
FHTRLRREKETYASLSSREQARVRALWRQAASLRSTFTQLKTFTDRTLSDMRGECAAVSQ
LLHATCQNLETRISEKSGSETSALEMQLKDKLKETMQLQFSWDAEKVELNSRILELTDTL
SHFQNQKIEKDASFHTMSLEKMEMMRAEDRAEMAVVHTEVQGLQHILYQIHQLVQGENSD
SESMSTSLPHGKFPSGNSTLMAVQNVLSKHLKESQEMHARLTKALEQVGTFKEQLQEKND
ERAELEQMIQEMQEKHQEAEKALEESLKESLCTLELLSSERGRLEKLRSVLQQEVDSQRV
ELDVLRSSSLDLQRQRDLLRQQREDLETQLSRQHSEARRGERALEDLESKYSDLRRELIT
VKESLDQVTLQKEMLEDDKASLSKALSKMECHSAAQESLLIKLRSQHSTLKDSLIKLAAL
SEGLAKDKVELSRIVLQTEGEKTELSERRCEAEGKRAAAREDAARAQKEMMNMLAEKQAF
ESSHILLRELCQKLEAELSLLHRERAEALKKQSEVSRQMQTLQEELCACRKELEEKITAV
KTAAQHREALAKDKAALEVKLNSADQKACTLSQELVALRAEKKSLEATIFESQELSTSLE
AKLTRLEGERSSLSLANEALTRDAAQMRVDAEQQLQQAAKQQRLLEEKLTEVERNALLVR
NNTEQIHREQLEAEHKQTEQQFAELAVQQQQAEEQLRVQCEDLRARNQRALQQVQDELAK
LQKEFSQRLLQAESKKQQALLQQEAEKASLTSKIASLQQDLATASMEMKRMQREVLSRQE
LDKVKNAVVVRCELKDLQHKFVESLASHQSTRKSLMENIRELNQHKELAKQELEDLCCRL
QEAEDSLLEAKKDLTEAHRELQGCVQERDKLQKEALELRQELADETSEREAIQVSNQELR
AFIKRVESENNSLRRALEEKQHNESILEESSSSTHKEAATLRSSMRELEKSHLEARRELQ
ELRRQIKVLESKNRWQKQELVKLQSQVCQEEKRAEEAQREAFVLSQRVLDIEAAKDAALS
EVAGLQCRVMELEAAERQSRELLHEREANQQQRGQRHRETTALLEEVLEDSKTQINELSV
KLSLAENKAQSLEEQLTLSNAICRDLEHQLAGWNAALHCTVDVNHVRLLHKHGSQTRSSS
PSRRYFHVTEGEYGPEESGLPLLNSEDEELNVKSVQATLQGLIKDAQREKDEAQAQTVSL
SQHVTDLKVSQEKLLSQLLEVQRSLRLSEEEKQEMTRQLHKVQASLTLQQDVAYCKEKES
RNLEGQLAQLKTSLQASQTKCRSLQDKMEVLQELETGANAENQKLKKSLEAAQSRASFLE
LSQCTLQGELQRAHLRTAEQDAEAAALRERLTEARRRLCESEDHCAALRVSEERLAVSLT
RAEQHENVLREQVRTLSNTVSRTGKNTEGLQKQVTELQRVLTASEEDRRLLQESLDKTRE
ALSESKRLNYSLTEQTQSLNSAQQDLYVRISELEKSNRMLKESQKQQEEAQLQRSMHIDR
EKKELQEKLAGMQSSLQKLQNEKAKMEKALTHLSKDKSALRKTLEKVEMKRLRKEEEVVS
VAREKAQLEQTLQSLEKELTEEQRVVQTLKIQIPEMERAHAQHLLEVTAHHHRELDLETE
RLRDSRLQAELSLESRKMAHCQRVRHLEE
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcgtcgagagcaagatggacactcaccaagactggaggctgtgattcagaaa
ttggagacgactctgcttcagtcagacagcaactcaggagacagaagtctgatacttcaa
gggaatgtggaagaatctggagctactcctatccccatcgcctctcacatttgtcagatc
atcgcccacaacctggctgaacagcctgctggtgagagcgttgaggttagcaagcaggag
gagagcggtaccctgaaggagcattcttctcccagccagatggacgacgaccagccacta
gtcaaacaaaccagactcacagagagggcccacctggactcagctgagcttcagaagcgt
gttgagcaagatcttaacattgttatccaaaaacagactgctctgctgcaggaggagcga
agccggagtgccagcctaagccaagtcaactctgtgctacgggaacaactggaccaggta
gacattgtcaacaagggcctaatggagagcttaaggaaggcccgcgaagatgctcagtgg
tttcatactcgcctgcgcagagagaaagagacgtacgcctccttgtcgagtcgtgagcag
gctcgcgtcagggcgctgtggcgccaggccgcctccctgcggagcactttcacccagctg
aagactttcactgacaggactctgtctgacatgcgaggtgaatgtgctgctgttagtcaa
ctgctgcatgctacatgccagaacttggagaccagaatatcagaaaagagtgggtctgag
acgtcagccctggagatgcagctgaaggacaagctgaaggagaccatgcagcttcagttt
tcctgggatgcagagaaagttgaactaaactccagaatcttggagctgacggataccttg
agccacttccagaaccagaaaattgagaaggatgcaagctttcacaccatgagtctggag
aagatggagatgatgagagcagaagatagagcagagatggcagtagttcacactgaggtt
caaggactgcaacacattttataccaaatacatcagttggttcagggtgagaactctgac
tctgaaagtatgtccacctcactaccccatggcaagtttccgtcaggaaacagcaccctc
atggctgtacagaatgtactttctaagcatctgaaagaatctcaggagatgcatgcccgt
ttgacaaaagctctggagcaggtgggcacatttaaagaacaactgcaggagaagaatgat
gagagggccgagttggagcagatgattcaggaaatgcaagaaaaacatcaggaggctgaa
aaagctctagaggaaagcctcaaagaaagtctctgcacattggagctgctctccagtgag
agagggaggctggagaagctgcgttccgtgctgcagcaggaggtggactcccagcgagtg
gagctggatgtactgaggagttcgtcactggacctccagagacaacgagacctcctgagg
cagcagagggaggacctggaaacgcagctgtcacgccagcactcagaagcccgcagaggg
gaaagagctttagaggatcttgagagcaaatactcagatctccggagggaactgattaca
gtgaaggaatctctagatcaagttactctgcagaaggagatgctggaggatgacaaggcc
agcctttctaaggctctaagcaagatggagtgtcacagtgctgcacaggagagccttctg
atcaaattgcggagtcagcattctacccttaaagattctctcattaaactggctgctctt
agcgaaggtctcgccaaagacaaggtggagcttagtcgcattgttcttcagacggaaggc
gagaaaacggagctcagtgaacgcaggtgtgaagctgaagggaagcgagcggcagccaga
gaggacgcggcgcgagcgcagaaggagatgatgaacatgcttgctgaaaaacaagccttt
gaaagctcccacattctactgcgagagctctgccagaagctggaagcggaactgagcctc
ctgcacagggagagagccgaggccctgaagaagcaatcggaggtgagcaggcagatgcag
actttacaagaggaactgtgtgcatgcaggaaggagctagaagaaaagatcactgctgta
aagacagctgcccaacatagggaagcgcttgccaaggacaaggctgctctggaagtcaaa
ctaaactctgctgaccaaaaagcctgcactctctcacaggagcttgttgcactgagagca
gagaagaaatccctggaggcaactatattcgagagccaggagctctctacgtccctggag
gccaagctcaccaggctggagggcgagagatccagcttgagtctggctaacgaggccttg
acgcgtgatgctgctcagatgcgtgtggatgccgaacaacagctacaacaagctgcaaaa
caacaaagactgttggaggaaaagctgactgaggtggaaagaaatgcccttttggtgcgg
aacaatacagagcaaattcacagagagcagctggaagccgaacataagcaaacggagcag
cagtttgcagagctcgctgtccaacagcagcaggctgaagagcagctacgcgtgcagtgc
gaggacctgcgtgcgcgcaaccagagggcgctgcagcaggtgcaggatgagctggcaaag
ctgcagaaggagttcagccaaaggctcctgcaagctgaaagcaaaaagcaacaggctttg
ttgcagcaggaagctgagaaagcttcccttacatcaaaaatagcatctctccaacaggat
ctggctacagccagcatggagatgaagcgtatgcagagggaagtgcttagcagacaagag
ctggacaaggtaaagaatgcagtagttgttaggtgtgagctgaaggacttacaacataag
tttgtagaatccctggcctctcatcagagtactaggaaaagtctcatggagaacatcaga
gaactcaaccaacacaaagaactagcaaaacaggagttagaggatctttgttgtcggctg
caagaagcagaagacagtcttcttgaggccaaaaaagatctgactgaggctcacagagag
cttcaaggctgtgtgcaggagcgagacaagttacaaaaagaagcactagagctgaggcaa
gaactggccgatgagaccagcgagagagaagccatccaggtttctaatcaggagctcaga
gctttcatcaaaagagtggagagtgaaaataacagcctcagacgagctttggaggagaag
caacataacgagtccattttggaagaaagtagcagctcaacacacaaagaggcagccact
ctgaggagctctatgcgggagctggagaagtctcatctggaggcccgcagagagctgcaa
gaactgcgcagacagataaaggtccttgaaagcaagaacagatggcagaagcaggaactg
gtgaagctgcagagccaagtatgtcaggaggaaaagagggcagaggaagcacagcgggag
gcttttgttctcagtcagagagtgctggacatcgaggctgccaaggatgcagcgctcagt
gaggttgcaggtctgcagtgtcgtgtgatggaactggaagcagctgagcggcaaagccga
gagctgctgcatgaaagagaagccaatcagcagcagaggggccagaggcacagagaaacc
acagctctgctggaagaagtgctggaggactccaagacgcaaatcaacgaactttctgtc
aaactcagtctggctgaaaacaaggcccaaagcctggaggagcagctaactctgagcaat
gctatatgccgggacttggagcaccagctggcagggtggaatgcagctctgcactgcact
gttgatgtcaaccatgtgaggctgttgcacaaacatggatcacaaacaagatcctcctct
ccctcaaggagatacttccatgtgacagagggagagtatggaccagaggaatctggacta
cccttgcttaattctgaagatgaagaattaaatgtgaaatctgtgcaagcaactttgcag
gggttgatcaaggacgcccaaagagaaaaggatgaagctcaggcccagacggtcagtctg
agtcaacatgtgactgacttgaaagtctctcaggagaagttgctcagccagctgctggag
gtacagcgctccctcaggctatcagaggaggaaaaacaagaaatgacacgacagttgcat
aaggtgcaagcgtccctcaccctgcagcaggatgttgcatattgtaaagagaaggaaagc
agaaaccttgagggtcagttggctcaactcaagacttctcttcaagcctctcagactaaa
tgcaggtcattgcaggacaagatggaggtcttgcaggagttagaaactggtgcaaatgct
gaaaaccagaaactgaaaaagtctctggaagcagcgcaaagcagagcgagcttcctggag
ctttctcagtgcacccttcaaggtgagctacagagggcccacctcagaacagcagagcag
gacgcagaagctgcggcccttcgggaaagacttacagaagcaagacgaagactgtgcgag
agtgaagatcattgcgcagcactcagggtcagcgaggagaggttggcggtgtcgctgact
cgagctgagcagcatgagaacgtgctgagggagcaggttcgtacgctttcaaataccgta
agtcggactgggaagaacacagaaggtttgcagaagcaagtaaccgagctgcaaagggtt
ctgactgctagtgaggaggaccgaagactgctgcaggagagtttggataaaacccgggaa
gcactttcagagagtaagaggctgaactattcactcactgagcaaacccagagccttaac
tcagcacaacaggatttatatgttagaatatctgagctggagaaaagtaaccgaatgctg
aaggagagtcagaagcaacaggaggaggctcaactccaaaggtccatgcacatcgacaga
gagaagaaggaattgcaggaaaagctcgccggcatgcagagctctttgcaaaagcttcag
aacgagaaagcaaagatggagaaggcgttgacacaccttagtaaagacaagtctgctctt
agaaagacattagagaaagtggagatgaagagactcagaaaagaggaggaggtggtatct
gttgccagggagaaagcccagctggagcagacactgcaaagcctggagaaagagctgact
gaagagcagagagtagttcagactctcaagatccaaatcccggagatggagcgcgctcat
gcacagcacctcctggaggtgacagcccatcatcacagggaactggatttagagacggag
cgcctgagggacagtcggctccaggcggagctgtccttggagtccagaaagatggctcac
tgccagagggtcagacacctcgaggaatag
DBGET
integrated database retrieval system
