Poeciliopsis prolifica (blackstripe livebearer): 129379855
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Entry
129379855 CDS
T09758
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129379855 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129379855 (xrcc4)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129379855 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
SHE3
Hormone_1
NET2A_C
Motif
Other DBs
NCBI-GeneID:
129379855
NCBI-ProteinID:
XP_054916754
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MNTSVREIQLFSQTDFSYFLRVDWDGRGLGFGFKLLLTDGQKAWRGKVSEAVVDEEAEEL
EMVKEKYIQDLQQALTEPEPSDSYCFTLKPHPPTSGCTVTLTYEKMQKDISFKLGSVLLE
AVEEPAEAVREVLIHTLQRGNTLQQHNHKLKEENQRLMQEHQYITEKLTHYAEGVETLKA
ELYSRFVLLLNEKKTKIRSLQEAFTKLQETRNSDEQKNKDSAKSDQTAGHNSEDDEYGGS
TDEELKEEKSTGASHMSSRDSATPSPLNLRDITDVAPCRKRRFRHLGPPELAVKKQNPEA
AQKKRTHSSAASSQLQTPQRSVDATKAASAGTSEAEDLFDDF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcagtgcgtgaaatccaactcttctctcagactgacttctcctactttcta
cgagtggactgggacgggcgtggattaggcttcggcttcaagttgcttttgacagatgga
cagaaggcatggagaggaaaggtgagtgaggcggtggtggatgaagaggcagaggaactg
gagatggtgaaggagaagtacatccaggacctccagcaggctctaacagagccagaaccc
tctgactcctactgcttcaccttgaagccacacccacccaccagtggctgcactgtgact
ctgacatatgagaagatgcagaaggacatatccttcaaacttggctccgtcttgctagaa
gccgtagaggagccagctgaggcagtgagagaggtgctgatacacacactgcagcgagga
aacacactgcagcaacacaaccacaaactgaaggaggagaaccagaggctgatgcaggaa
caccaatacatcactgaaaagctgacgcactacgctgaaggtgtagagaccctgaaggca
gagctctactctcggtttgttctgctcctcaatgagaagaaaacaaagattcggagtctg
caggaggctttcacaaagctgcaggaaacaaggaattctgatgaacagaaaaacaaagat
tctgcaaaatctgatcaaacagcaggtcacaacagcgaggacgatgaatatggaggcagt
actgatgaagagctgaaggaagagaaatcaacaggagcttctcatatgtcatctcgagat
tctgctactccgagccctttgaatctccgcgacatcaccgatgttgctccctgtcgcaag
cgtcgtttccgccatcttggtcctccagagctcgctgtgaaaaagcagaatccagaggca
gcacagaagaaaaggacacactcctctgcagcatccagtcagctgcagactccccagcgc
tctgtagatgctacaaaagcagcttcagcaggaacttcagaagctgaagacctatttgat
gatttctga
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