Poeciliopsis prolifica (blackstripe livebearer): 129379930
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Entry
129379930 CDS
T09758
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04136
Autophagy - other
pprl04140
Autophagy - animal
pprl04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129379930 (atg4b)
04140 Autophagy - animal
129379930 (atg4b)
04136 Autophagy - other
129379930 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129379930 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129379930 (atg4b)
03029 Mitochondrial biogenesis [BR:
pprl03029
]
129379930 (atg4b)
Peptidases and inhibitors [BR:
pprl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129379930 (atg4b)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129379930 (atg4b)
Mitochondrial biogenesis [BR:
pprl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129379930 (atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
129379930
NCBI-ProteinID:
XP_054916859
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDEILSDITSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALMCRHLGRDWIWAREQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVIIEEIK
RLCMPWLDQAGEAAGEGEVNGCLEGACALAEEETALWRPLVLLIPLRLGLSDINEAYIET
LKQCFMLPQSLGVIGGKPNSAHYFIGYVGQELIYLDPHTTQPAVEPREDGQVPDDTYHCQ
HPPCRMHICELDPSIAAGFFCKTEDDFDDWCMRIRRLSCKKGGLPMFELVDSQPVHMVSV
DTLNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagccacattgacatacgacacacttcgctttggagagtttgaagattttcct
gagacctcggagcccgtgtggatcttggggaaagaatacaatgcacttacagagaaagac
gagattctgtccgacatcacgtctcggctgtggttcacgtacagaaaaaacttcccgccc
atcggagggaccgggccaacgtcggacacgggatggggatgtatgttgcggtgcggccag
atgattctcggagaggccttgatgtgcaggcacttaggcagagactggatttgggccaga
gagcagaaacaaagagaagagtacatcagtattctcaacgccttcatcgacaaaaaagac
agctattattccatccatcaaatcgcccagatgggtgtcggagaggggaagcctattgga
cagtggtatgggcctaacacggtcgcccaggttctgaagaagctggctgtgtttgatacg
tggagcagattagttgtgcacgtggcgatggacaacactgtgatcatcgaggagatcaag
cgtctttgcatgccgtggctggaccaagcaggtgaagcagcaggagagggggaggtgaac
ggctgcctggagggagcgtgcgccctggccgaggaggagacggctctgtggaggccgctg
gtcctgctcattcctctcaggctgggcctgagtgatatcaatgaggcctacatcgaaacg
ctcaagcaatgcttcatgctgcctcagtcgctgggtgttattggggggaaacccaacagt
gcccattacttcattggttatgtcggtcaggagctcatctatttagacccacacaccacg
cagcctgccgtggagccgcgcgaagacggccaggtccctgatgacacgtaccactgtcag
cacccgccctgccgcatgcacatctgtgagctggacccgtccatcgcggcgggtttcttc
tgcaaaacggaggatgatttcgacgactggtgtatgcgcatacgcaggttgtcctgcaag
aaaggaggcctgcccatgtttgaattagtagacagccagcctgtccacatggtcagcgtc
gacacccttaaccttactcctgatttctcggactcggacaggctggagcggttcttcgat
tcggaggacgaggagtttgaaatcttgtccctgtga
DBGET
integrated database retrieval system
