Pimephales promelas (fathead minnow): 120459075
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Entry
120459075 CDS
T08155
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03272
Virion - Hepatitis viruses
pprm03273
Virion - Lassa virus and SFTS virus
pprm04140
Autophagy - animal
pprm04142
Lysosome
pprm04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120459075 (lamp1a)
03272 Virion - Hepatitis viruses
120459075 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120459075 (lamp1a)
04142 Lysosome
120459075 (lamp1a)
04140 Autophagy - animal
120459075 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120459075 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120459075 (lamp1a)
04090 CD molecules [BR:
pprm04090
]
120459075 (lamp1a)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120459075 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
120459075 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
120459075 (lamp1a)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
120459075 (lamp1a)
CD molecules [BR:
pprm04090
]
Proteins
120459075 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Coat_P
DUF7662
Motif
Other DBs
NCBI-GeneID:
120459075
NCBI-ProteinID:
XP_039502928
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MTVVKQCFSAGVCTLLMGCVFVAHAVTFEVTDGNSTCIKAELDANFSISYNTTNGTSEAV
FAMPSSASVGNRSSCGGAGVPPELVMSFGAGHMISLMFSSNGQLYRVTNISLQYNLSDPD
TFPQSSTAGVVSVTTNSSEIAARVNSTYRCLSSSIISLSAGVNVTFSDLRMEAYMTSANL
STDESVCSADQTSTTVSPTHTPRTTAAPPAPPHTPERGNYNVTNGNGTVCLLALMGVQLN
VTHFSKSLNQTVSEVMNLQPTSTRASGSCGVKVATLALTQDQTDLTLTFTLNSTTQKFHL
SAVNFSAFWSDMTDRFEASNASLELLQCSVGRSYMCSAEQTLAVAPDFSINTFSLQLQPF
NVTESRFSAAEECRLDQENMLIPIIVGAALAGLVLIVLIAYLIGRKRTHAGYQTI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgttaaacagtgtttttctgcaggtgtctgtactctgctgatggggtgtgtg
tttgtggctcatgctgtgacatttgaggtgactgacggaaactccacctgcattaaagca
gaactcgacgcgaacttcagcatctcctacaacaccaccaatggaacgagcgaggcggtg
tttgcgatgccctcctcagcatcagtgggcaacaggagctcgtgtggcggcgctggcgtt
cctccagagctggtgatgtcattcggagcgggtcacatgatctctctcatgttctccagc
aacgggcagctctacagagtgaccaacatcagcctacagtacaacctcagcgaccccgac
accttcccacaatcctccactgcaggggtcgtatccgtgacgacgaactcctccgagatc
gctgcgcgggtgaacagcacctacaggtgtttgagctcctccatcatcagtctgagcgca
ggagtgaacgtcaccttctctgacctgcggatggaggcgtacatgacctcagccaacctc
agcactgacgagagtgtttgcagtgctgatcagacgtctaccaccgtcagcccgacacac
acaccccgaaccaccgctgcaccccccgcccccccacacaccccggagcggggcaactac
aacgttaccaacggcaacggcaccgtctgtctcctggcgctgatgggggtgcagctcaac
gtcacacacttctcaaagtccctgaaccagaccgtcagcgaggtcatgaacctgcagccc
accagcaccagggcctcggggtcgtgcggggtcaaggtcgccaccctggcgctgacccag
gatcagaccgacctcacgctcaccttcacactgaactcgaccacacagaagtttcatctg
agcgccgtcaacttctccgccttctggtctgacatgacggatcggttcgaggcgagtaac
gcctctctggagctgctgcagtgcagcgtgggccgctcgtacatgtgcagcgctgagcag
acgctcgctgtggctcccgacttctccatcaacaccttcagtctgcagctccagcccttc
aacgtcaccgagagccgcttctctgcagcggaggagtgtcgtctggatcaggagaacatg
ctgatccccatcatcgttggagcggctctggccgggctggtgctgatcgtcctcatcgcg
tatctgatcgggaggaagaggacacacgccgggtaccagaccatctga
DBGET
integrated database retrieval system
