Pimephales promelas (fathead minnow): 120459084
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Entry
120459084 CDS
T08155
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120459084 (arntl1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120459084 (arntl1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_IRO3
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
120459084
NCBI-ProteinID:
XP_039502942
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MADQRMDISSTMNEFISQSSADLISSSIGTTGMDYTRKRKGSTTEYQIDGFSFDDSMDTD
KDKTLGRDEQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR
MAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESV
YKILNYTQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGP
SRLCSGARRSFFCRMKCNRPSVKMEDKDFSSTCSKKKADRKSFCTIHSTGYLKSWPPTKM
GLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNSDIRVKPTEYVSRHAIDGKFVFVDQR
ATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITL
RSRWFSFMNPWTKEVEYIVSTNTVVSGGMLEGADPSYSQTASSPQSMDSVLTSGDGGGKR
SLQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNITATPPPDTCSPG
GKKIQNGGTPDLPSAGIVPGPDSIGYPYSNNSLMSDNSHLSIDIMEEPGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaagaatggacatctcctccacgatgaatgagttcatatcccagagctcg
gcagatctcatcagcagttccattggcaccacgggcatggactacacccgcaagaggaag
ggcagcaccaccgaataccaaattgatggcttttcctttgatgatagcatggacacagac
aaagataagacactgggaagggatgaacagcagggccggataaagaatgccagggaggct
cacagtcaaatagaaaagaggcgcagggataagatgaacagtttcatagacgagttagca
tcgttagtccccacttgcaatgccatgtctcgcaagttggacaaactcactgtactgcgc
atggccgtccaacacatgaagacattacgaggtgccaccaacccatacacagaagccaac
tataaaccagcattcttgtcggatgatgaattaaagcacttgattttaagggctgctgat
ggcttcctctttgtagtcggttgcgatcgtggaaagattctcttcgtctcggagtctgtt
tataaaatcctcaattacacgcagaatgatctgattggccagagtttgttcgactacctg
catccaaaagacattgccaaagtgaaagagcagctgtcgtcgtcagacacggctccacgg
gaacgactcatcgatgccaaaactggtctaccagtgaagactgacatcactcccggcccc
tccagactgtgttcaggggcccgccgatcattcttctgtagaatgaaatgcaaccgtcct
tctgtcaagatggaggacaaagacttttcctcaacgtgctccaaaaagaaagcagaccgc
aagagtttctgcaccatccatagcactggctatctgaaaagctggccgcccaccaagatg
ggtttggacgaggataacgaacctgataatgagggctgcaaccttagctgtctagtggcc
atcggccgcctccatccgcatatcgtccctcagcccatgaacagcgacatccgcgttaaa
cccacagaatacgtctcccgccacgctatcgatggcaagttcgttttcgtcgaccagagg
gcgacagccatcctggcatacttgccccaggagcttttagggacgtcgttttatgagtat
tttcaccaggatgatatcggtcacctcgccgagtgccacagacaagtgctacagatgaga
gaaaagattaatactaactgttacaagttcaagattaaagacggatcattcatcactcta
aggagccgctggttcagcttcatgaacccctggaccaaagaagtggaatatatagtctct
acaaacactgtggtttcgggcggcatgcttgaaggagcagatcctagttattcccagaca
gcctcgtcccctcagagcatggacagcgttttaacatcaggagacggtggagggaaacgc
tctcttcagacggttcctggtattccgggagggacaagagcgggcgctggcaagatagga
cgcatgatagctgaggaagtgatggagattcagaggattcgaggctcctcaccctccagc
tgtggctcaagtcctttaaatatcactgccactcccccaccagacacctgctctccaggg
ggcaagaagattcaaaatggtggaactccagacctgccgtcagcaggaattgtgcctgga
cccgattcgataggatacccgtattcaaataattcattaatgagtgataactcacatctt
agcattgacatcatggaagagcccggatccagcagccccagtaatgacgaggcagccatg
gctgttatcatgagcctcctagaagcggacgctggccttggtggacctgtggatttcagt
gacctaccctggcctttgtga
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