Pimephales promelas (fathead minnow): 120459107 Help Entry 120459107         CDS       T08155                                  Symbol acanb Name (RefSeq) aggrecan core protein   KO K06792   aggrecan 1 Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:pprm00535]     120459107 (acanb)    00536 Glycosaminoglycan binding proteins [BR:pprm00536]     120459107 (acanb)    04091 Lectins [BR:pprm04091]     120459107 (acanb) Proteoglycans [BR:pprm00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    120459107 (acanb) Glycosaminoglycan binding proteins [BR:pprm00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    120459107 (acanb) Lectins [BR:pprm04091]  C-Type lectins   Lecticans    120459107 (acanb) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF I-set PGDH_inter Motif Other DBs NCBI-GeneID:  120459107 NCBI-ProteinID:  XP_039502980 LinkDB All DBs Position Unknown AA seq 1357 aa AA seqDB search MSLTWLLLYTCIHAIYGNILFGDMADQDSTLSVSIPVEQPLQPLLGGSMVIPCYFLDNTV QDPGAPTIAPLSHRIKWSYIYKGKISLILVASGGLVQVQTDYLDRVHMVNYPMVPTDATI EISELRSSDSGTYRCEVMQGIEDNYDSVGMQVQGIVFHYRAISTRYTLTFEMAKAACIQN SAAIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRDI NETYDVYCFAEKMSGKVFYSMSVEKFTFAEAEDQCSKLGAQLATTGQLYLAWKTGMDVCN AGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYEENTNKVFT KTSPYPEIHTTTDSMFSVATVTSSPSDYTEDVTTEGEARGQLVTDEPLNTTSIESSLLPY NITEVEEDAIKVATALPYLGYEIAKDNVTAKTKGVTFHHRAESRRYAYTFEEAQVACQKL GAVIATPELLQAAYEAGLHQCSAGWLQDQTVRYPIVHPRKKCSGDQEDTPGVRSYNVRPA HERYDVYCYMDQIKGEIFHVSSLAGFTYYEAAAHCRKLGSTLASTGELYAAWNQGFHKCS PGWLADRSVRYSVRNPSFGCGENKTGVHTIYAEPNQTGFPNPYSRYDAYCFKANLSILLD EDVLNGTSYKDLNMTDLQELLRPVRPIVPPLIVDLSGSGSGSGSASGDPDSSSGYISGSG IPSGSTSGSGQSGEGSVHLVRFQEGADTLIWQTSASGSASEAKEGSGSGSGAIIALEIES GDQESGEESGLFPAQSGASGLPSGLSSGISGSGRSGFFSGGESSGSDVTFIDTKMIDLTA RPSGEQELSGINPFDWTDVSGSGFPSGFGSGSAIDFGSGSASGFVPGSASGFVPGSGSGF GSGSAIDFGSGSASGFVPGSASGFVPGSASGFGSGSASGFVPGSASGFGSVSASGFGSGS VSETSTYSGHPLGEASGHIQKQDGEIAILIENEVFELLFNSTIGPEQGRGSVEISGEGSS QALYVEEISISLSNRTLYEDYWNPNEADDVLPERNEQLNFTTQVFDVSDQSPLNTTPPTT VFTTSPSEQTSKAMEEPSVTDASANPCDPNPCGQGLCSLQDGSAVCLCHPGFSGENCSTL IQGCAEGWVEFMGSCYIHFDERETWTSAEQRCQELNSHLVSISSRQEQEFVRTQAHDYQW IGLNDRDEQNQFRWTDGSPLEYDNWRPNQPDDYFSTGEDCVVMIWHEDGQWNDVPCNYHL PFTCKIGPVTCSSPPEVKNARMLGIRKDRYPANSIIRYQCDSGFTQRHISVVHCLPDGQW EKPQVECIEGKTNNRLRKRFLKRLTKAVNSQTWRKIL NT seq 4074 nt NT seq  +upstreamnt  +downstreamnt atgtctctgacttggcttctgctgtatacatgcatccatgccatttatggcaatatattg ttcggagacatggctgatcaggacagcaccctcagtgtgagcatccctgtggaacagcca ctgcaacccctacttggcgggagcatggtcataccctgctactttctggacaacactgtc caggaccctggtgccccaaccatcgccccactgtcccaccgtattaagtggagctacatc tacaagggcaaaatatccctcattctggttgcctctggtggcttggtgcaggttcagacc gactacttggaccgggttcatatggtgaactaccccatggtgccgactgatgctaccatt gagatctcagaactccgctccagtgactctggcacctaccggtgtgaggtcatgcagggg attgaagataactatgattcagtggggatgcaagttcaaggtattgtgtttcactaccga gctatttctacccgatatacattgacatttgagatggcaaaagcagcctgcatccagaac agtgctgctattgcaactcccgcacagttgcaagctgcctatgatgatgggtaccatcaa tgtgatgccggctggctttcagatcaaactgtgaggtatcctattcatgagccaagggag ccttgctatggagacaaagaaaattttccaggggtacgaacatatggagtccgagacatc aatgagacctatgatgtgtactgttttgcagaaaaaatgtcaggcaaggttttctactcc atgtcagtggagaagttcacctttgcagaggctgaagatcagtgttcaaagttgggagcc caattagccaccacggggcaactgtacctggcatggaagaccggcatggatgtgtgcaat gctggctggctagcagacaggagtgtgcggtaccccattaacatagctcgaccccagtgt ggtggggggcttttgggagtgagaacggtttacctgtttccaaatcagactggttatcca tacccagactcccgctatgatgcaatctgttatgaagaaaacactaataaagttttcaca aagacctcaccatatcctgaaatacacactaccaccgattccatgttcagtgtggctaca gtcacctcaagcccatcagactatactgaagacgtgaccacagaaggggaggcccgtggg caactggttacagatgagcctcttaacaccacaagcatagaaagttccctactaccttac aacataactgaggttgaggaggatgccatcaaagtggccacagctctgccttatctggga tatgagattgccaaggacaatgtcacagctaaaacgaagggagtgacattccaccatcgg gctgaatcgaggcgctatgcttacacctttgaggaagctcaagtggcgtgtcagaagctg ggagcagtcatagccacccctgagctccttcaggctgcttatgaagctggccttcatcaa tgcagtgcaggttggctacaggaccaaactgtcaggtatccaattgtgcatcctcgaaag aagtgctctggagatcaggaggacacccctggtgtgcgctcctacaatgttaggcctgct catgagcgttacgatgtttactgttacatggatcaaataaagggggagatcttccatgtg agttcactagcaggcttcacctactacgaagctgctgcccattgcagaaaactgggttct actctagcctcaactggagaactatatgcagcatggaatcagggtttccacaagtgcagt cctggctggctggctgatcgcagtgtccgctattctgtccgcaacccaagcttcggttgt ggtgaaaacaaaaccggagtccacactatttatgctgaaccaaaccaaacaggctttcca aacccatactccagatatgatgcatactgcttcaaagcaaatctgtctatactccttgat gaggatgtgttgaatggtacaagctacaaggatcttaacatgacagaccttcaagagctg ctgagacctgtacgtccaattgtccctcccttgattgtggacctgtctggatctggatct ggatcaggctcagcatcaggcgatcctgattccagttctggatacatatcagggagtggc atacccagtgggagcacatctggttctggccaaagtggagagggatcagttcaccttgtg agattccaagaaggtgcagatacactgatatggcagacttctgcctcaggcagtgcttcg gaggctaaagaaggtagtggcagtggtagtggtgctatcattgctttagaaatagaatct ggggaccaagaatctggagaggagtctggcctcttcccagcacaaagtggagctagtggc cttccatcaggactcagcagtggaattagcggttcaggaagaagtggattcttcagtggt ggggaatcaagtgggtcagatgtgacatttatagacacaaaaatgattgatctgactgca agaccatctggagaacaggaattgtctggtattaacccatttgactggactgatgttagt ggttctggctttccctctggctttggatctggctctgccattgactttggatctggctct gcctctggatttgtgcctggctctgcttctggctttgtgcctggctctggttctggcttt ggatctggctctgccattgactttggatctggctctgcctctggatttgtgcctggctct gcctctggatttgtgcctggctctgcttctggctttgggtctggatctgcctctggattt gtgcctggctctgcttctggctttgggtctgtatctgcctctggattcggatctggctcc gtctctgaaacctcaacttattctggtcatcccttgggtgaggcgtctggccacattcag aaacaagatggagagattgccattctaatagagaatgaggtatttgagttgctatttaat tctaccattggaccagaacagggtcgtggatcagtggagatcagtggagagggcagtagt caagcactatatgttgaggagatctccatatctctttctaatagaactttatatgaagat tactggaatcccaatgaagcagatgatgtcctaccagaaagaaatgagcaacttaatttc accacacaagtgtttgatgtgtctgatcagtcacctctgaacaccacaccacccaccact gtattcaccacttcaccttcagaacaaacgtcaaaagctatggaagagccatctgttact gatgcttctgctaacccctgtgacccaaacccctgtggtcaaggtttatgctctctacaa gatggcagtgcagtatgtctgtgtcatccaggatttagtggggaaaactgctcaacactg atacagggatgtgccgaggggtgggtggagtttatgggcagctgttacatccattttgac gagcgtgagacctggaccagtgctgagcagcgctgtcaagagctaaactctcacctggtt agcatatcctcccgacaagaacaagagtttgtaagaactcaagctcatgactatcaatgg attggactcaatgacagggatgaacaaaatcagtttcgctggacagatggaagtcctttg gaatatgacaactggagacccaaccagccagatgattacttcagcacaggagaagactgt gttgtaatgatatggcatgaggatggccagtggaatgatgtaccttgcaactatcatctt ccttttacctgcaagattgggcctgtcacatgttcatcacctcctgaagtgaagaatgcc aggatgttaggcatcaggaaagatcgctaccctgctaactccatcattcgataccagtgt gacagcggattcacacaacgtcacatttctgtagtgcactgcttacctgatggtcagtgg gagaagcctcaagtggaatgcatagaaggcaaaacaaacaacaggctacggaaaagattc ctcaagagacttaccaaggcagtcaatagtcagacgtggaggaagattctctaa

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