Pimephales promelas (fathead minnow): 120459111
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Entry
120459111 CDS
T08155
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04260
Cardiac muscle contraction
pprm04261
Adrenergic signaling in cardiomyocytes
pprm04814
Motor proteins
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120459111 (tpm1)
04820 Cytoskeleton in muscle cells
120459111 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120459111 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
120459111 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120459111 (tpm1)
04147 Exosome [BR:
pprm04147
]
120459111 (tpm1)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120459111 (tpm1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120459111 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
ATG16
Crescentin
PUMA_CC
DUF745
DUF3450
Lebercilin
Laminin_I
TMF_DNA_bd
CENP-F_leu_zip
ERM_helical
DUF16
SlyX
DUF1664
Motif
Other DBs
NCBI-GeneID:
120459111
NCBI-ProteinID:
XP_039502984
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDRSKQLEDDLLALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIVEAELERTE
ERAELNEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FSERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcaaatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggctgagggagacaaaaaggcagcggaggacaggagcaaacagcttgag
gatgacctcctagcactgcagaagaaactcaagggcactgaggatgagctcgacaaatat
tccgaggctcttaaagatgcccaggagaaactggagctggctgagaagaaagccgcagat
gctgagagtgatgtggcgtccctgaacagacgtatccagctggttgaggaggagttggac
cgcgcacaggagcgtttggccactgccctgcagaagctggaggaggccgagaaggctgcc
gatgagagcgagagaggcatgaaggtcattgagaacagagctctgaaggatgaggagaag
atggagatccaggagatccagctcaaggaggccaagcacatcgctgaggaggccgaccgc
aaatacgaggaggtggcccgtaagctggtgatcgttgaggctgagctggagcgcacagag
gagcgtgccgagctgaatgagggcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtccctggaagcccaggctgagaagtactcacagaaagaagacaaa
tatgaggaggagatcaaggttctcactgacaaactgaaggaggccgagacccgtgccgag
ttctctgagaggtcagtcgccaagcttgagaagaccatcgacgatcttgaagatgagtta
tattcccagaaactcaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacttcaatataa
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