Pimephales promelas (fathead minnow): 120459256
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Entry
120459256 CDS
T08155
Symbol
ddx39aa
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120459256 (ddx39aa)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120459256 (ddx39aa)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120459256 (ddx39aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
120459256
NCBI-ProteinID:
XP_039503023
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSN
VKCAVFFGGLSIKNDEDVLKKSCPHIVVGTPGRILALIRNKTLNLKNVKHFVLDECDKML
EQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGL
QQYYAKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMA
QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG
TKGLAVTFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctgtgccaggcaaagtctggtatgggaaaaactgctgtgtttgtgcttgcc
acactccaacagatcgagccagtggatgggcaggtttctgtgttggttatgtgccacaca
cgtgaactggccttccaaatcagtaaagagtacgagcgcttctccaagtacatgtccaac
gttaagtgtgccgttttctttggcggcttgtccattaaaaacgacgaggacgtgttgaaa
aagagctgccctcacatcgtggtgggaacaccagggaggatccttgccctcattcgcaac
aagaccttgaacctcaaaaatgtcaaacactttgttttggatgaatgtgacaagatgctg
gagcagctggatatgagacgggatgtccaggatatcttcagactgacacctcacgagaag
cagtgcatgatgttcagcgccacattaagcaaagagatcagaccagtctgtcgcaaattc
atgcaagacccaatggaggtctttgttgatgatgagactaagcttacgctccatggtctt
cagcaatactatgccaaactgaaagacagcgaaaagaaccgcaaactgtttgaccttctt
gacgttcttgagttcaaccaggtggtgatatttgtcaagtcagttcaacgctgcgtggct
ctgtctcagctgctggtggaacagaattttccagccattgcgatccacaggggaatggca
caggaagaaagattgtctcggtatcaacagtttaaagattttcaacggcggatcctggtg
gctacgaatctgtttggccgtgggatggatattgagcgtgttaatatagttttcaactat
gacatgcctgaggactccgacacatacctacacagggttgctcgcgctggaaggtttggc
acaaaaggattggctgtcacctttgtatcagatgagactgatgcaaagatcctgaatgat
gtgcaggaccgttttgaagtcaacgtagcggagttgcctgaggaaatcgacatctccacc
tacattgagcagtccagatga
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integrated database retrieval system
