Pimephales promelas (fathead minnow): 120459754
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Entry
120459754 CDS
T08155
Symbol
si:ch211-222f23.6
Name
(RefSeq) nectin-3 isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecules
pprm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120459754 (si:ch211-222f23.6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120459754 (si:ch211-222f23.6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120459754 (si:ch211-222f23.6)
04090 CD molecules [BR:
pprm04090
]
120459754 (si:ch211-222f23.6)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
Nectin family
120459754 (si:ch211-222f23.6)
CD molecules [BR:
pprm04090
]
Proteins
120459754 (si:ch211-222f23.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
ig
C2-set_2
I-set
Ig_4
C1-set
Ig_5
M2AP_beta_dom
Motif
Other DBs
NCBI-GeneID:
120459754
NCBI-ProteinID:
XP_039503116
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MLLFISRTLSPPHNLGCKPVLSSEVRFRLAESDNMHRRRNACDPSLYSLILIYLKCSSIA
GVKIIGHDTTVVKGGNASLFCHLTEMEDNLTHIVWQKQTRGIHEQHSFFIIHKDGKTQHR
NYLQDTVRFIGNFNENNGSIQLLGMSLLDDGIYTCIFNTFRGQILTNINLTVHVRPATRV
TGRTHVSNHYDTTLASCVASNARPAAEVLWRLGALNDSLRTETSSTQHSDGTVTVVANIL
GPPSKHLNQKKIQCVVKHSTLTKEHELDYVMNIHYPPELMMIIPDDPTDAEEFHCFVDCN
PTPTSYIWIKVNGSTPHSEGNKLFIPKSSSDRNGMYICTASTDYGNVSGVLYVDNTGSTD
GWELLGFISCCAILGFTVVFILLRV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttattatttatctcacgcactctctctcccccccacaatctgggatgcaaaccagtc
ctgtcttccgaggtgcgcttcagacttgcagagtcagacaacatgcacaggagaaggaac
gcttgcgatccatcactctatagtctgattttgatttatctcaaatgctcaagcatagcg
ggtgttaagattattggccatgatacaacagttgtgaaaggagggaatgcgtctttgttt
tgtcatttgactgagatggaggataatttaactcatatcgtttggcagaaacagacaaga
gggatccatgaacagcacagcttctttatcatccacaaagatgggaaaactcaacacagg
aattatttacaggacacggtcagatttattgggaactttaacgagaataatggctcgatt
cagctgctgggaatgtcgctcttggatgatgggatctacacttgcatcttcaacacattt
agaggacaaattctgacaaacattaatctcacagtacacgttcgtcctgcaacgagagta
acgggaagaactcatgtttctaatcattacgacacgactttggcatcatgtgtggcctcg
aatgcacggcctgcagcagaagtgttgtggcgattaggagctctgaatgactctctgaga
acagaaaccagcagcacacagcactcagacgggaccgtcactgttgtggccaacatactg
ggtcctccatctaaacatttaaaccagaagaagatccagtgtgttgtaaaacacagcaca
ctgacaaaggagcatgaactcgactacgtgatgaatatccactatcctccagaattgatg
atgataatccctgatgatccaacagatgctgaagaatttcactgtttcgtggattgtaac
ccaacaccgactagctacatctggatcaaagtgaatggaagcactccgcattctgaaggg
aataaactcttcatcccaaagtcttcctctgatagaaatggtatgtacatctgtacagca
tcaaccgattatggaaatgtgtcaggtgtgctctatgtggataacactggatccactgat
ggttgggaactgttgggctttatctcctgctgtgcaatcctggggtttactgtggttttt
attcttctcagggtctga
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