Pimephales promelas (fathead minnow): 120459797
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Entry
120459797 CDS
T08155
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04814
Motor proteins
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120459797 (dync1i2a)
09142 Cell motility
04814 Motor proteins
120459797 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120459797 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120459797 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120459797 (dync1i2a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120459797 (dync1i2a)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120459797 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Dynein_IC2
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
120459797
NCBI-ProteinID:
XP_039503191
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEAELKKVAVPQQDDSDLEKKRREAD
ALLQSMGITSDTPAVPAPVSPTAKSVGTPSEAGSQDSGEGVTGPRTLHWDCDPSTLLLHS
ELGRGPMKLAMAKTTHVDFPPKEVVSYTKETQTPTTTQQKEEEDEEEEAPAPQPEVEVEK
EKPVEKHEEEASPHELTEEEKLQILHSEEFMEFFDHSTRIVERALSERVDVFFDYSGRDM
EEKEGEMQAGAKLSLNRKFVDDRWSKQRVVTCLDWSPLYPELLVASYNNNEESPHEPDGV
ALVWNMKYKKATPEYVFHCQSAVMSASFAKFHPNLVVGGTYSGQIVLWDNRSNRRTPVQR
TPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSMELVFKQSKSV
AVTSMSFPLGDVNNFVVGSEDGSVYAACRHGSRAGISEMFEGHHGPITGIHCHTATGPVD
FSHLFLTASFDWTVKLWSSKNNKPLYSFEDNSDYVYDVMWSPVHPALFACVDGLGRIDLW
NLNNDTEVPSVSVAVEGSPALNRLRWSQSGREIAVGDSEGQIHIYDIGEQIAVPRNDEWT
RFVRTLVEINENRDDAEELAAQRLSA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataaaagtgagctgaaggccgagcttgagcgaaagaaacaacgcttggctcag
attagagaggagaagaagagaaaggaggaggaacgcaagaaaaaagaggctgagctgaag
aaggtggccgtcccacagcaggatgactcagacctggagaagaagcgcagagaggcggat
gctcttctgcagagtatgggcatcacgtctgacacacctgcggttcctgcacccgtgtct
cccacggccaaatctgtgggaactcctagtgaggccgggagccaagactcaggagaaggg
gtcaccggaccaaggactctgcactgggactgtgacccctctactcttctgcttcactct
gagctgggacgtggtcctatgaagttggcaatggcgaagacgacccacgtggatttccca
cccaaagaggtggtgtcctacaccaaggagactcagacgcccaccacgacgcagcagaaa
gaggaggaagatgaggaggaagaggccccagcaccacagccagaggtggaggtagagaaa
gagaaaccagtggagaaacacgaagaggaagcgtcccctcatgagctaacagaagaggag
aagttacagattctgcactcggaggagttcatggagtttttcgatcacagcacacgcatc
gtggagcgcgctctgtccgaacgcgtggatgttttcttcgactacagcggccgggacatg
gaggagaaggagggtgagatgcaggctggggcaaaactgtctctgaacagaaagtttgtt
gatgaccgctggtccaaacagcgagtggtaacttgtctggattggtccccactgtatcca
gagttgctggtcgcctcttacaacaacaatgaggaatccccacatgagcctgatggagtg
gctttggtctggaacatgaaatacaagaaggccacaccggagtatgtcttccactgtcag
tctgcggtcatgtccgcatcgtttgcaaagtttcatcctaacctggttgtcggtggcact
tattcaggacagatcgtcctgtgggacaacagaagtaacaggcgcacccctgtccagagg
acccctctctctgctgcggcccacacgcacccagtgtactgcgtgaatgtggttggcaca
cagaacgctcataacctcattagcatctctactgatggaaagatgtgctcctggagtctg
gacatgctgtctcaaccacaggacagtatggagctggtgtttaagcagtctaaatccgtt
gcggtcacctccatgtccttccctctgggtgacgttaataactttgtggtggggagtgag
gatggatcagtgtacgcagcctgtcgccatggcagtcgggcagggatcagtgagatgttc
gagggacatcatggtccaatcacaggcattcactgtcacacagcgactgggccggtagat
ttctctcatctcttcctgaccgcctcttttgattggaccgttaaactctggagcagcaag
aataacaagccgctgtactcttttgaggataactcggattatgtgtatgatgtgatgtgg
tctccggtacatcccgccctgtttgcttgtgtcgacggactcggacgcatcgacctgtgg
aacctcaacaacgacaccgaggtgccctctgtcagcgtggctgtggaagggagtcctgct
ctgaacagactgcgctggtctcagtcgggcagagagatcgctgtcggggactcagaggga
cagatacacatctacgacatcggcgagcaaattgcagtcccgcggaacgacgaatggacc
cggtttgtgcgaacactggtggagatcaacgagaaccgtgacgatgctgaggagctagcc
gcccaacgcctttccgcttga
DBGET
integrated database retrieval system
