Pimephales promelas (fathead minnow): 120459823
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Entry
120459823 CDS
T08155
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120459823 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120459823 (stau1)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120459823 (stau1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120459823 (stau1)
mRNA cycle factors
Stress granule specific factors
120459823 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
120459823
NCBI-ProteinID:
XP_039503230
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSQLQFQTPVNTAPSAAPLQLAPPQPGFSIPCATAPLPSESASHPLRNSALPSASATPFC
NPTVSNMANPKEKTPMCLINELARYNKIQPEYKLLSEQGPAHSKIFSVRLSLGDQHWDAE
GTSIKKAQHSAASCALAETTLPKPSHRSPRHPGKNPDGIYKGLDYNVTHTVELNALCMKL
GKKPIYKPIDAYHGMRPAFNYNIRAPGPYARSMQHYYYPFPPVGPVLYHMELSIGGQQFH
GKGRTRQAAKHDAAAKAIKYLQKEPIMQQLSEMKEEPVQENLNKSEISQVFEIALKRNLP
VNFEVLKEAGPPHMKSFMVRVTVGEYSGEGDGKSKKIAKKLAAIAVLEELRGLPQLPVTD
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYALVTERGLPRRREF
VMQVSIAGQNAEGMGPSKKVAKRNAAEKMLELLGFKVPQPQPPKPALKTDEKAPAKKPGD
GRKVTFFEPGSVDKAGLAVNKEEDFRIPFLSHQQLPAGILPMVPEVAQAVGANQGPHAKD
YGRTAAPNPAMATVTAMIANELLYAGTSPTAEGILKTKNSLAHRPHGPLTRPSEQLSYLA
TVQGLQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELD
QQSNERTANGPMSGCNKQDLEGSALLKPANSSTIGKTLDGTV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccagactcctgtcaacactgcacccagtgccgcccctttacag
ctggccccgccccaacctgggttcagcattccctgtgccactgctcccttaccctcagag
agtgccagtcacccgttacgaaactccgccctgccttctgcatccgccacacccttctgc
aaccccacagtatctaacatggcaaaccctaaagagaagaccccaatgtgcttgataaac
gagttagcccgttacaataagatccaacctgaatacaagcttctcagtgaacaaggacca
gcccactccaagattttctcagtgcggttatctctgggggatcagcactgggatgcagag
gggaccagtatcaaaaaagcccagcactcagcagcgtcatgtgcccttgccgaaactact
ctccccaaacccagtcacagaagcccccgccaccctggcaagaacccagatgggatctac
aagggcttagattataacgtaacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctataagcctatagatgcctaccatgggatgagaccagcattcaac
tacaacatcagagcaccgggcccttatgcacgctccatgcagcattattactacccattt
cctcctgtggggccagtactgtatcatatggagctgtctatcggtggacaacagttccat
ggcaagggccgcacgcgtcaagcagccaaacatgatgctgcggccaaagctatcaaatac
ctacagaaagagccaataatgcagcaactgtctgagatgaaagaagaaccagtgcaagaa
aaccttaacaaatccgagatcagccaagtgttcgagattgcactgaagcgcaacttgcct
gtgaatttcgaggtgctaaaagaggctggtcctcctcacatgaagagcttcatggtgagg
gttactgtgggcgagtattcaggggagggggatggcaaaagcaagaagatcgccaagaag
ctagctgccatcgctgtgctggaggagcttcgcggactgcctcaactgcctgtcacagac
aaaataccactacgtattaaaaagaaaagcaagtcaattattaagctgcagaccagtcca
gagtatggtcagggcatgaaccccatcagcagactggctcaaatccagcaagcgaagaaa
gaaaaagagccagagtacgcgttggtgacggagagaggcctgcctcgacgccgggagttt
gtcatgcaggtgtcaattgcgggtcagaatgcagagggaatgggtcctagtaaaaaagtg
gccaaacgaaatgcagccgagaagatgctggagcttctgggcttcaaagtgcctcagcca
caaccacccaaaccggcattgaaaacagatgagaaagcacctgctaagaaacctggagat
ggacgaaaagtgaccttctttgaaccgggatctgtggacaaggctggtcttgcagtcaac
aaggaagaagatttccgaattccttttctcagccatcagcagcttcctgctggcatttta
cccatggtgcctgaggtggcacaggcggtgggtgccaaccagggaccccatgcaaaagac
tacggtcgtacagctgcccccaacccagccatggccacagtaacggccatgattgccaac
gagctgctgtacgctggcacgtccccgaccgcagagggtatactaaagactaaaaacagc
ttggcacacagaccccacggaccccttactagaccatccgaacagctcagctacctggcc
actgtacagggattacaggttgaatataaagactttcccaaaaataacaagaatgagttt
gtgtctctgatcaactgctcctctcagccccctctcatcagccacggcattggcaaggat
gtggagtcctgccatgacatggctgctttgaacatcctgaagctcctgtcagaactcgac
cagcagtccaatgagcgcacagctaatggaccaatgtcagggtgcaacaaacaggaccta
gagggcagtgcattattaaaaccggctaactcaagcaccatcggaaagactctggatggc
acagtgtag
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