Pimephales promelas (fathead minnow): 120459876
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Entry
120459876 CDS
T08155
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120459876 (irf2bp1)
04121 Ubiquitin system [BR:
pprm04121
]
120459876 (irf2bp1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120459876 (irf2bp1)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Atypical E3
120459876 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
120459876
NCBI-ProteinID:
XP_039503285
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPAGKHGPAGKEGPMESGRPPSERYDRGRGEYVSGRLPNGLPRLEDGGP
PEVSRQSPTARRPLVGAVPPSLMAQGLVGAPHGLLTAMPGLNARTGGAPLTISAPMLNEI
SKRQALGMGMNVGVASFMSPEFERELKEKQRNAEALSELSESVRNRTDEWPGRPKHMRDA
LHTLSSCTPFNVRFKKDHGLVGRVFAFDAKLMVEFELKVFVEYPCGSGNVFSSVLALVKQ
MFHDSQKDTGKVINSGYKYVEYEKRHGTGDWRLLSELLSDAVRAFKDAPAPDALPQSYLD
ASCSMLPTALCHIGRPTQPRVRRRKASPEPEAAERMISEEIRQHWSLVYPGIPGHMPATS
LASSGQPPETHSSDPSPITALMSVADNVGTAVPKDAPGSSGSHSANAGRQNSTSPSPAGG
QRRLASRNGEPSAGSSSGGPTTTVTVPLADQSAVMGAEGSGGTVGGAPLCCTICHERLED
THFVQCPSVPGHKFCFPCTRDFIRRQGSGSEVYCPSGEKCPLVGSNVPWAFMQGEISTIL
AGDVKVKKERDP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcgcaggcatcttccaggcgacaatggtgctacctttgcgacctgcca
aagatgccctgggccatgatttgggacttcagcgaggccgtgtgcagaggctgtgtgaac
tacgagggcgcggacagaatcgagttgctcatcgacacggcgcggcagctcaagcgaaca
cacgtgatgcaggacggcagatctccgggtccgcagcccgccggtaaacacggtcccgct
ggcaaggagggtcctatggagtccggtagaccgccctccgagcgatatgatcggggaagg
ggagaatatgtgtccggcaggctgcccaacggactgcctagactggaggacggtggtccg
cctgaggttagtaggcagagtcccactgccaggaggcctttggtgggggctgtgccaccc
agtttaatggcgcaggggcttgtcggagcccctcacggtctgctgaccgccatgcctggt
ctgaatgcccgaaccggtggcgcccccttgaccatttctgctcccatgttgaacgagatc
agtaaaagacaggcactgggcatgggcatgaacgtgggtgtggcatccttcatgagccct
gagtttgaaagggagcttaaggagaagcagaggaacgctgaagccctcagcgagctctcc
gaaagcgtgaggaaccgcacggacgagtggccggggcgccccaaacacatgcgtgacgcc
ctgcacaccctctctagctgcaccccgtttaacgtccgctttaagaaggaccacggcctg
gtggggagggtgttcgccttcgacgccaagctgatggttgagtttgagctgaaggttttc
gtcgagtacccgtgcggctcaggtaacgtgttctccagcgtgttagcgctagtcaaacag
atgtttcacgactcccagaaagacactggcaaggtcattaactcgggctacaagtacgtg
gagtatgagaaaaggcatggcaccggcgactggcgtctcctctcagagcttctcagcgac
gcggtgcgagcgttcaaagacgcgccagccccggacgccctcccgcagtcgtacctggac
gccagctgctccatgttgcccaccgcgctctgccacatcggccgtcccacgcagccgcga
gtacgccgacgcaaagcctcgcccgagccggaagccgccgagaggatgatctcggaggag
atccgccagcactggtccctcgtgtaccctggcattcccggccacatgcccgctacgtcg
ctagccagctcagggcagcctccagagacccacagtagcgacccatcgcccatcactgct
ctcatgagcgtggctgacaacgttggcactgccgtcccgaaagatgccccgggcagcagc
ggaagccactctgcgaacgcaggccggcagaacagcaccagtccttcacccgctggcggt
cagcggcggctagcgtcgcgcaacggggaaccgtcggccggcagtagctcgggagggccg
accacgaccgtcaccgtccccctcgccgaccagagcgctgttatgggagctgaaggctca
ggaggaaccgtaggaggagcccctctctgctgtaccatctgccacgagcgcctggaggac
acacacttcgtccagtgtccatcggtgcccgggcacaagttctgcttcccttgcacccga
gacttcatccgcagacagggctcggggagcgaggtgtactgccccagcggggagaagtgc
cccctcgtgggctccaacgtgccctgggccttcatgcaaggcgagatctccaccatcctg
gccggagacgtgaaggtgaagaaggaaagagacccctaa
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