Pimephales promelas (fathead minnow): 120459892
Help
Entry
120459892 CDS
T08155
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120459892
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120459892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
120459892
NCBI-ProteinID:
XP_039503302
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MGKNRTTNSGLHAHCEKCHNQDCKIPIDISTSCVFIFCQLNCGAAFHLCKEDEHRLLCPK
ETVPCLNSGYGCPITMTRQKIAPHLEVCPASVITCTFEWNRWPVNETDTTFYRNAIQDPN
CMSQLDLAMALRDQKLLFSSIQMKTLFPELVEKMEEPEVPLDGAVGGVDPESPNLPPEEM
LENSLNGEEGQGLTQEERLALAKSKDVTCLENYEMWERMFAKEKEGCKQTVKNLDDKSCP
IKDKEDPKVTPQNSNDDISGTGLAPWQDGVLDRLGKLNVAEYNMYLVHNGSMLINFGQLA
ACTPREKDFVYGNLEPIEVQTIHSFNFPTSYRPKRSHLKDPSKIVKKTHQNVDTSDLGIA
IEKLPKANEIEATLLCALERELKGHQICESVGIDGLYVDCGTQTYDFHSAPFKSDASLAN
VVEDQPQNLHVQIQTECVTRRHNKSCSAFSYLCCNAFRRDEYPWHFRNVHGDIQSCLTGW
FLQRCPLAYLGCTFSQKQFRPSKYKATVSYDTDLSTFILRPEVVPSLNKGVRIADSERKR
ARNLDSLSRLPFEVLQHIVSYLDSVSLGRLSQVSKLMREVCSTVLQQKGMVYLKWEKKTY
SHGGFTWRARKKVWEFSTLHSPVDKWVFEDMPPMAEHLKVCPFYQKEIRSEPVPLPSMTD
LQERRGEFQTLVNSVLTTVKSHRE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaataggaccaccaactcaggtcttcacgcacactgtgaaaaatgtcataac
caggactgcaagattcccatagacatctcaacgtcctgtgtcttcattttctgccagctg
aactgcggtgcagccttccatctttgtaaagaggacgagcatcgtcttttgtgccctaag
gaaactgtaccatgcctcaactctggctatggctgtcccattaccatgactcgccaaaaa
attgcccctcacctagaagtgtgtcctgccagtgtgatcacttgtaccttcgaatggaac
cgatggcctgtgaacgagaccgataccaccttctacagaaatgccatccaggatccaaac
tgcatgagccagttagaccttgctatggcccttagagatcagaagcttctgtttagctca
attcagatgaagacactcttccctgagttggtagagaagatggaggagcctgaagttcca
ctggatggtgctgttggaggtgttgatccagagtctccgaacttacccccggaagaaatg
ttggagaatagtcttaatggggaagaaggacaaggactaacccaagaggagaggctggcc
cttgctaagagtaaagatgtgacctgcttggagaactacgagatgtgggagagaatgttt
gcgaaggagaaggaaggatgcaagcaaaccgtgaagaatttagatgataaaagttgtccg
attaaggataaggaagaccccaaagtgacccctcagaattccaacgatgacatttccgga
acaggtttagctccttggcaagatggcgttcttgacagactcggtaaactcaacgtggcc
gagtataatatgtatctggtgcacaacggaagcatgcttatcaactttggtcagctggct
gcttgcacacctagagagaaagattttgtttatggtaatttggagcccattgaagttcaa
accatacactctttcaactttccaaccagctacagacccaagcgtagccacctcaaggat
ccatcaaaaatagttaagaagacacaccagaatgtggacacatctgatttaggtattgct
attgaaaagctcccaaaggcgaatgagatagaggcgacactgctgtgtgcactagaaaga
gaactgaaaggtcatcagatatgtgagtctgttggaatcgacgggctatatgttgactgt
ggcacccagacctatgactttcactctgctccattcaaaagtgatgcatctttggccaat
gttgttgaggaccagccgcaaaacctacatgtgcagattcagacagaatgtgtgactagg
agacacaacaaatcctgctccgcctttagttacctgtgctgtaatgcttttaggcgtgac
gaatacccctggcactttagaaacgtgcatggagacattcagtcatgtcttacaggctgg
tttttacagcggtgcccactggcttaccttggttgcaccttcagccagaagcaatttcgg
ccatctaaatataaggctacagtgagctatgatacagatcttagcactttcatcttacga
ccagaggtggtaccgtcacttaacaaaggagtaagaatcgctgacagtgaacgcaaacga
gcaaggaatttggattctctgagcagacttccttttgaggttttacaacacattgtgagt
tacctggacagtgtgtctttgggtcgtctatctcaagtttccaagttaatgagggaggtg
tgcagcactgttcttcagcaaaagggtatggtgtaccttaaatgggagaaaaagacatac
tctcatggtggattcacctggagggcccggaaaaaggtatgggagtttagcactctgcac
tcgccagtggataaatgggtctttgaagacatgccgcctatggcagagcacctgaaggtc
tgtcctttctatcagaaggagattcgaagtgaacctgtcccattacccagcatgacagat
ctccaggagagaagaggagaattccagactctagtcaatagtgtcctcactactgtcaag
tcacacagagaataa
DBGET
integrated database retrieval system