Pimephales promelas (fathead minnow): 120459900
Help
Entry
120459900 CDS
T08155
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120459900
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120459900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_Teneurin
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
120459900
NCBI-ProteinID:
XP_039503316
LinkDB
All DBs
Position
Unknown
AA seq
2067 aa
AA seq
DB search
MSELWRLSFCMSFLSLAIANSSSVSHQITGSPLMSHDLIHPLQSRSKPQRQRHHSNSTRI
QIDLKGPNVCGSRCCHSWLVNPKTKQCTKPRCHPRCHNKAVCRRANVCQCRPGFHGHRCE
HADVNPTPGTWSEAQQGPVEHSYGATTATVTTATPASTTPHPDISTSASSPDPRKTHSLR
WQPHSLKEAESVLLKRALSSGTGGEKITSVILKYIESERRRLESSSSTGETKLSSTKTFH
TQRGQYTLLYTAAVAQHSSSSLAHGGPERIKVLFTPTVCRLRCAQGRCTNYCERGNITTI
YNSEQGGQTPPGSGFRVFLCPMLCKNGGVCVQKDQCLCPPNFTGKFCHIPVQTSSFTNHI
EKPAGRAVDSANQPMTSEYILPLQTPELTNTNASPMVKVRVQHPPEASVKIHQVLKVGYG
PAGHERSETVTWSAGLSGARPRHLQLPGEKAEAPAPQVQAQTLRGDSVYTEASGFKYCFR
EVRNGQCSSPLPGLRSQEMCCRGLGKAWGISECTLCPALSGNTVNGQGVCPKGFERVNGT
QCVDINECLQPGFCENGNCVNTRGSYSCVCKEGYLLDASHGICISQKVISEEKDQCFRIL
NQGSCSLPILRNITKQICCCSRVGKAWGKKCQLCPFFGSAAFKEICPAGPGYHYSASAVK
FNQRLAEVLDTGGPPLVSENGRTSSQGIGSQPESSLSTRIQQPTNTQTIRVQQPSISLST
RPQKPNAGPQTGTVITITQPNPNLSTGGGSQTTNTRFQPSGVRPGNAASTNQPARANTPV
VRTQTSRPSVNRQPVSPVRPPVPTARPLLTRQDARACELRPQVCGSGRCIDLPGGKHTCV
CNTGYILNPQLGQCQDRNECLLTPRPCSVGQCENTAGSFRCVCPSGYQTNSQQTLCVDFD
ECRQVPNPCINGRCENTLGSFRCVCRTGYKLQENSCIDIDECVDPLRCSGQECVNSQGSY
RCVSCKPGFDLLNGLCSDIDECRRTPSPCPDGRCENTPGSYRCACRNGYRLQANTCVDVN
ECEDPLQCPGQECVNSLGSYRCVSCRPGFSFKNGACSDIDECRQTPSPCSNGLCENTPGS
FRCVCGAGFRLQGGTCTDVNECEDPLQCPGQECVNSQGSYWCVSCRPGFSLKNGACSDID
ECRQTPGLCVNGRCENNVGSFSCLCPPGFRLEGNICEDVNECENELQCPGRECVNSVGSF
KCVSCQPGFELLDGHCQDTDECSLDRTRCTNGQCRNTPGSFRCVCAVGFQLQDSACTDID
ECLDTLQCPGQQCLNSPGSYKCVPCRDGHSMQDGRCADIDECAGPRVCGPESVCVNTDGS
YRCDCLPGYRSAGPRRQCRDINECLEGDFCFPSGECVNTDGSFKCVCANGYTSAVNATSC
QDVDECSQEGVCQDGRCTNTEGSFLCHCQTGFTTSPERTACLDVNECLDSERSVCGSQRC
ENTIGSFHCVASCEPGYHITATGECVDINECTNETVCGLHAFCQNLIGTYQCLCDQGYES
TGDGQMCVDINECETMQGVCGSAHCWNVEGSVVCECENGQEEFDPLAKQCVSRESTGRTR
PSGAASSGRGSAGSSGSVSGSLPQSRPGEMKECYYGVSEPYSCKILSRNTTLQECCCTAG
QGWGLLCQYDICPQAGTAEYQSLCPSGKGYVTMETGAFSYKDVDECKLFDPEICKGGVCV
NNIPGYACYCPSGFYYDTDLLECIDHDECQSEDTCTGGVCVNTLGMFYCTCEPPLVLDDT
RRNCVNASGLAEDENLNFCWRHVTASLVCQSPLLGSQLTFTECCCLVGEAWGLQCALCPR
RDEEAYEALCNELGPPPQSPRYYERFGPGGGGFLPPYAYPEAQPGRPDYMPTDYEDYSPA
GAGRRRSGLRERPPTSYGLPDAPYRPAGGSRYYEEDDYESAPGPPFGLPDPRGERTFDAR
PLPPRPDGRPLSLAPLPENSRYHEAEGEESWRAPPPFPMFPDRREGPRRVYERRYDSYGS
LSSEDCGIVQGCDNGRCIRVEEGYTCDCYDGYQLDITTMTCIDVDECEEEDTLDCINARC
VNTEGSYRCVCLRGFIMSRRPNHCILA
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaactatggagactgtcattttgcatgtcatttctttccctggcgatcgcaaac
tcctcctcagtcagtcatcagatcaccgggtctcctctgatgtctcatgatctcatccat
cctctacaaagcaggagcaaaccgcagagacagcgacatcacagcaactcaacgagaata
cagatagatttaaaagggcccaacgtttgcggctccaggtgctgtcattcatggctggtc
aaccccaagaccaagcagtgcacaaaacccagatgtcatccgcgctgccataataaagca
gtctgtcgccgggcgaacgtctgtcagtgtcgtccaggcttccacggccatcgctgtgaa
catgctgacgtcaacccgacccccggcacctggtctgaggcacagcagggtcccgtcgaa
cactcgtacggcgccaccacggcaacggttaccacggcgacgcctgcatccacaaccccc
caccccgacatctccacatctgcatccagcccagatccaagaaagacacactcattacgc
tggcaaccgcacagcttaaaggaggccgagtcggtcctgttgaagagagcactgtccagt
ggaactggtggagagaagatcactagtgttatactgaaatacattgaatcagagcgaaga
agactggagtcttcatcctctactggagaaaccaaactgtccagcaccaaaaccttccac
actcagcgtggccaatacacactcctttacactgcagccgtcgctcagcactcctcgtcc
tcgctcgcccacgggggtcccgagcggattaaagtgctcttcacccccaccgtctgccgg
ctgcgctgcgcacagggacgctgcaccaactactgcgagcgcgggaacatcaccaccatc
tacaacagcgagcagggaggacagacgccgccggggtccggattcagagtgttcttgtgt
ccgatgctgtgtaagaacggaggagtgtgtgtacagaaggatcaatgtctctgcccgcca
aacttcacggggaagttctgccacatccccgtccaaacctcctccttcaccaatcacatc
gagaaaccagcgggaagagctgtggattcggccaatcagccgatgacgtctgagtacatc
ctgccgctccagacgccggagctgaccaacaccaatgcgtcccccatggtgaaggttcga
gtccaacaccctcccgaggcgagtgtgaagatccaccaggtgctgaaggtgggttacggg
ccggcgggacacgagcgctcggagaccgtcacctggtccgcggggctttccggagctcgc
ccgagacaccttcagcttcccggagagaaagcggaggcgccggcgccgcaggtccaggcc
cagaccctccgcggggactccgtctacaccgaggcgtccggcttcaaatactgcttcagg
gaagtgcggaacggacagtgcagttctccgttacccggcctgcggagtcaggagatgtgt
tgcagaggactcgggaaagcctgggggatcagcgagtgcacactctgcccagcgctctca
ggaaacaccgtgaacggacagggcgtctgccccaaaggcttcgagcgggtcaacgggacg
cagtgtgtggatattaacgagtgtttgcagccgggtttctgtgaaaacgggaactgtgta
aacacccgagggagctacagttgtgtctgcaaagagggctacttactggacgcctctcat
gggatctgcatctcgcagaaggtgatctcggaggagaaggaccagtgtttccgtatcctg
aaccagggctcctgttctcttcccatcttgaggaacatcacaaagcagatctgctgctgc
agtcgagtgggaaaagcctgggggaagaagtgccagttatgccctttcttcggctcagct
gccttcaaggagatctgtcctgctggaccgggttaccattactcggcttcggctgtcaag
tttaaccagagactagccgaggtgcttgacaccggcgggccgcccttggtctctgaaaat
ggtcgtacatcctcacagggcataggatcccaacctgaaagctcactgtcaaccagaatc
caacaaccgaccaacacgcaaaccatcagagtccaacaaccctccatctctctgtccacg
agaccacagaaacccaacgcgggtccacagaccggcacggtcatcactataactcaaccc
aatccaaacctgtccactggtggcggctctcaaaccacaaacaccagatttcagccctcc
ggtgttcgtcccgggaacgccgcctcaaccaaccagccggccagagccaacacgcctgtt
gtccgtacgcaaaccagccggccctcggttaacagacagccagtttctccagtcagacct
cctgtgccgacagcccgaccactgctgactcgacaagatgcccgagcgtgtgaattgcga
cctcaggtgtgcgggtcgggtcgctgtattgacctgccaggcggcaaacacacgtgtgtg
tgtaacacgggatatatactcaatcctcagctaggccaatgccaagacagaaacgagtgt
ctcttgacgcccaggccgtgctctgtgggacagtgtgagaatacggcgggcagcttccgt
tgtgtttgtccatcgggataccagaccaactcccagcagaccctgtgtgtcgatttcgat
gagtgccgtcaggttcccaatccctgtattaacggccgctgtgaaaacactctgggcagc
ttcaggtgtgtgtgcagaactggatataagctacaggagaacagctgcatagacatagat
gagtgtgttgacccgctccggtgttcgggtcaggagtgtgtgaactctcaaggctcatat
aggtgtgtttcctgtaagcctggctttgatctgctcaatggactatgctcagatattgat
gaatgtcgccggaccccgtccccgtgtcccgacggccgctgtgaaaacacacccggcagc
tacagatgcgcatgtcgaaatggatacagattgcaggccaacacctgtgtggacgtgaac
gagtgtgaggacccattgcagtgtccgggacaggagtgtgtgaattctctgggatcttat
aggtgtgtgtcgtgcagacctggatttagctttaaaaatggagcatgctcagatattgac
gaatgccgtcagacgccgtctccttgctcgaacggactgtgtgaaaacacacctggcagc
ttcaggtgtgtgtgcggagctggcttcagattgcagggcggcacctgcacagatgtgaat
gagtgtgaagatccattgcagtgtcccggacaggagtgtgtgaactctcagggatcgtat
tggtgtgtgtcgtgcagacctggatttagtcttaaaaatggagcatgctcagatatcgac
gagtgtcgccagactcctgggctgtgtgtgaacggccgctgtgagaataacgtgggaagt
ttcagctgtttgtgtccccctggattcagactggagggaaacatctgcgaagatgtgaac
gagtgtgaaaatgagcttcagtgcccaggaagggagtgtgtgaactcggtcggttccttc
aagtgtgtctcctgtcagccgggctttgagcttcttgacggacactgccaagacacagat
gaatgcagtctggaccggacgcgctgcactaatggccagtgtagaaacactcccggcagc
ttcaggtgtgtgtgtgccgtgggcttccagctacaggacagcgcttgcacagacattgac
gagtgtttggacacactgcagtgtcccggtcagcagtgcctgaactctccgggctcgtat
aagtgtgttccctgccgagacgggcacagcatgcaggacggacgctgcgcagacatcgat
gagtgtgcgggtcctcgcgtgtgtgggccggagagtgtgtgtgtgaacacggacgggtcg
tatcgctgcgactgcttgccagggtacagatcggccggtccacggcgccagtgtcgagac
attaacgagtgtctggaaggagacttctgcttcccgagcggagagtgtgtgaacacagac
ggctcctttaagtgtgtgtgtgcgaacggctacacgagcgccgttaacgcgacgtcctgc
caagatgtggacgagtgcagtcaagagggagtttgccaggacggccgctgcaccaacact
gaggggtcgttcctgtgccactgccagaccggcttcaccaccagcccagagagaaccgcc
tgtctggatgtgaacgagtgtttggactcagagaggagtgtgtgtggatctcagcgctgc
gagaacaccatcggctcgttccactgtgtggcgtcctgcgagcccggataccacatcact
gccacaggagagtgtgtggacatcaacgagtgcaccaatgagacggtgtgtggactccac
gctttctgccagaatctgatcggcacatatcagtgtctgtgtgaccagggctacgagtcc
accggcgatggacagatgtgtgtggacataaacgagtgtgagacgatgcagggcgtctgc
ggatctgcacactgctggaatgtggagggatcagtcgtgtgcgagtgtgagaacggacag
gaggaattcgacccgctcgcgaagcagtgtgtgagcagagagagcacaggtcgcacgagg
ccgtctggcgcagcctcgtcgggtcgtggttcggctggctcctcggggtccgtgtctggc
tctcttccacaatctcgacccggagaaatgaaggagtgttactacggcgtgtccgagccg
tactcctgcaagatactgtcccgcaacaccaccctgcaggagtgctgctgtacggcgggc
cagggctggggcctcctgtgccaatacgacatctgtccgcaagctggaacagccgaatac
caatcgctgtgtcccagtggaaaagggtacgttaccatggaaacgggagcattcagctac
aaggatgtggacgagtgtaagctgttcgatccggagatatgtaaaggcggtgtgtgtgtg
aacaacattcccggctacgcctgttactgtcccagcgggttctactacgacacggatctg
ctggagtgcatcgatcatgatgaatgtcagagtgaggacacctgcacgggtggagtgtgt
gtgaatacactggggatgttttactgcacgtgtgagccgccgctagtgctggatgacact
cggcgcaactgtgtcaacgctagtggcctcgcggaggacgagaacttaaacttctgttgg
cgtcacgtcacggctagtctagtgtgtcagagtcctctgttaggatctcagctgaccttt
accgagtgctgttgtttggttggtgaggcttggggtctgcagtgtgccctctgcccccgc
agagatgaagaggcgtacgaggccctgtgtaacgagctgggtcctcctcctcagtccccg
cgttattatgagcgcttcggcccgggaggaggagggttcctgccaccgtacgcgtacccc
gaagcccagccgggacgccccgactacatgcccactgattacgaggactacagcccagcg
ggagccggtaggaggaggtctgggctgagagaaagaccccccacttcctacgggctccca
gacgccccctacaggcccgcgggtggaagtcgttattatgaggaggatgattatgagagc
gctcccggccctcccttcggcctcccggaccctcgcggtgagcgaacgtttgatgcccga
cccctgccgccccgtcccgacgggcgtccactgagtctggctcctcttcccgaaaactcc
cggtaccacgaggccgagggggaggagtcatggagagccccgccccctttcccaatgttc
cctgacaggcgggaggggccacgaagagtctatgagcggagatatgactcatatggcagc
ctgagttcagaggattgtgggatcgtccagggctgtgacaacggccgctgtatccgtgtc
gaggagggctacacctgtgactgttacgacggatatcagctcgacatcacgaccatgaca
tgcatagatgtggatgagtgtgaggaggaagacacactcgactgcattaacgcccgctgc
gtgaacaccgagggctcgtacaggtgtgtgtgtctcaggggtttcatcatgtctcgaaga
cccaaccactgcatcctcgcctga
DBGET
integrated database retrieval system
