Pimephales promelas (fathead minnow): 120460001
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Entry
120460001 CDS
T08155
Symbol
cntn5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120460001 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
120460001 (cntn5)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
Contactins
120460001 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
Others
120460001 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Sp38
Interfer-bind
PKD
IMPa_N_2
Motif
Other DBs
NCBI-GeneID:
120460001
NCBI-ProteinID:
XP_039503550
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MGSPWKPLLLLSVISGLADFARAVAARPVSYAAVLRMKADSSSSSSLSSRMRLRNNYGVG
SPSQDWPPFSRYRYSALSSQEDYRSEESEEFGPVFIQEPDDAIFSLDSDDKKVIMNCEAR
GNPVPTYSWLVNGTNVDTEADFRYSLIDGNLIIHNASEAIDFGRYQCRAENSIGIVLSRD
ALLQFAYLGAFSGRTRGAVSVREGQGVVLMCAPPPHSPEIIYSWVFNELPSFVAEDSRRF
ISQEMGNLYISKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHF
PQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGS
YECKAENTRGGTAFRGHLQVYTQPQWISMINDTQLDSGEQLHWECRATGKPRPTYRWLRN
GEPLSTQSRVEMVNGELIIHRLQQADSGMYQCIAENKYGSIYSSAELKILASAPVFSTNP
VRLIATVGKDVSLECRPRASPKPRISWRKNDKRVQPSRRIMLLRNNTLRIINSSRSDEGS
YVCRAENQFGSAELTTALLVKEPMRVELSPIRVEVTVGESVVLSCKVTHDPSLDVSFLWL
LNTQPLNTLHEGSHFEYIQTQTSTADLMIRSILLKHAGKYGCRAQTSADSVLAEAELLVR
GPPGPPGVVIVEEITDTTATLSWSHGVDNHSPITTYNVQARSPVSLGWQTVKTDPDPVTG
SMESAMAVELNPWVEYEFRVVATNGIGTGDPSAPSRAVRTKEAVPSVAPANVRGGNGRRH
ELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTTYKYRDETFPPLTPFE
VRVGVYNNKGDGPFSGVVTVFSAEGEPREPPSEVQAFAISSSDIKVMWKPPIPGPGRPQG
YEVSFWKDIEQEETGKKKRTTGNETTMLLSGLEGNTQYLVSVKGFNSVGQGPASSAIKIS
TKKNAPSLPPGNLMWIQEGNNVSLSWDPVKARDNESEVIGYKVLLRQEGRGHSQVMRTPN
SAVVLTLPEGGTYIIEVRAVSEGGEGAASAQVRVLTSSGVRAKSGQLSGRNLAPGLAWTA
LFLSLLVPSFPL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccacttctcctgctgtcagttatcagcggcctagcagatttt
gctagagccgttgccgcgagacccgtctcatacgctgcagtgctgaggatgaaggcagac
agttcttcgtcatcctcattgagctccaggatgaggttaaggaacaactacggagtgggt
tcgcctagccaagactggcctccgttctccagatacagatactcagccctcagctcacag
gaggactacaggagtgaagagagcgaggagtttggtccggtgttcattcaggagccagat
gatgcaatcttctccctggattcagacgataagaaagtgataatgaattgtgaagccaga
ggaaaccctgttccgacctacagttggctggtcaacggaacaaatgtggacactgaagca
gatttccgctacagtttgattgatgggaacttaataatacacaatgcaagtgaggctatt
gattttggaagataccagtgcagagctgaaaacagcatcggcatcgtcctgagtcgagat
gccctcctgcagtttgcctatcttggggcgttcagcggtcggacaagaggagctgtgtcg
gtgagggaaggccagggggttgtgctaatgtgtgccccccctccgcattcaccagagatc
atctacagctgggtgttcaatgagctcccctcgttcgtggcggaggacagccggcgattc
atctcgcaagaaatgggaaatctgtatatctccaaggtgcagccctcggacgtgggcagc
tacgtgtgccaagtaaagaacactgtgacaaacgccagggtcctgagcccaccgacgccc
ctgactctcaaaacagatggtgtgatgggggagtatgagcccaaaattgaagcgcatttt
ccccagacggtgctggcagccaaaggtgtcacagtgaggctggagtgctttgcccttggg
aatcctgtccccactatcacctggagaaaaatgagtgggaacatccccaaaaaagcccgt
ctgcgcaaatcacaggctgttctcgagattcccaacatccagctagaggattctgggagt
tatgagtgtaaagctgagaacaccagaggaggcaccgccttcagaggacatctccaggtc
tacactcagccgcagtggatcagcatgataaatgacactcaactggacagcggagagcag
ctccattgggagtgtcgagctactggaaagcccaggcccacgtatcgctggctgcgcaac
ggagaaccgctcagcacgcagagcagagtggaaatggtgaatggggagcttatcattcac
agactacagcaggctgattctggaatgtaccagtgcatcgccgagaacaagtatggaagc
atctactccagcgcagagctcaaaatactggcatcagctcccgtgttcagcaccaaccct
gtccggctcatcgcaaccgttgggaaagatgtgtccctggagtgccggccacgtgcctca
cccaaacccagaatctcttggaggaagaacgataagagagtccagcccagccgaaggatc
atgctgcttcggaacaacaccctccgcatcattaactccagccgctcggatgagggaagc
tacgtgtgccgtgcggaaaaccagttcggttcagcagagttgacgaccgcgcttctggtg
aaagagcccatgcgggtggagttgagccccatccgggtggaggtgacggtgggagagagt
gtggtgctcagctgtaaagtcactcacgacccctcgctggacgtgtccttcctctggctg
ctcaacacccaaccgctcaacaccctgcacgagggcagtcactttgagtacattcagaca
cagacctccacagcagacctgatgatcagaagcatcctcctgaagcatgctgggaaatat
ggctgccgtgctcagacgagcgcggacagtgtacttgcagaagctgagctgctagtaaga
ggccctcctggacctccgggagtggtgattgtagaggagatcaccgataccactgcgacg
ttgtcatggagccacggtgttgacaaccacagtccaatcaccacctacaatgtacaggca
cgtagcccggtctctctgggctggcaaacagtgaaaaccgatccagacccagtgacagga
agcatggagtccgccatggcagtggagctcaacccctgggtggagtacgaatttcgggtg
gtggccacgaacggcatcggcacaggcgacccgagcgccccctccagagcggtccgcact
aaggaagcagttccgtcagtagcccctgccaacgtgagaggtgggaacggccgcaggcat
gagctggtcatatcctgggagcctgtctcagaagaattccaaaacggagaaggtttcggc
tacatcgtggcattccgggccaacggcacacgtggatggaaagagaaaatggtgacctca
gcagactccaccacctataaatacagagacgagaccttcccccctctcaccccgtttgag
gtgcgcgtgggggtgtataacaataaaggagacgggcccttcagcggggtggttactgtg
ttctctgcagaaggagaacccagggagcctccttcagaagtgcaggcgttcgccatttca
tcctctgatattaaagtgatgtggaagccgcccattcctggccctggaagaccccaaggc
tacgaggtgagcttctggaaagacattgagcaggaggagacggggaagaaaaagaggacc
acggggaatgagacgaccatgctgctgtccgggctggagggaaacacacagtatctggtc
tctgtgaagggattcaacagcgttggccaaggaccagccagctcagccattaagatcagc
actaagaaaaatgccccaagtctacctccaggcaacttgatgtggatccaagaggggaac
aatgtttctctatcctgggatccagtgaaagcaagggacaatgagtcagaagtcattggg
tacaaggtattactgcgtcaggagggacggggtcacagccaagtcatgaggacgccaaat
tcagccgttgtcctgactctacccgagggggggacatacatcatcgaggtgcgcgcagtc
agtgaaggaggtgaaggggccgccagcgctcaggtcagagtgctcacatcctcaggagtg
cgtgcaaagagcgggcagctctctggccgtaatcttgctccgggcttggcatggactgct
ctttttctgtcattattggtgccttcttttcccttgtga
DBGET
integrated database retrieval system
