Pimephales promelas (fathead minnow): 120460101
Help
Entry
120460101 CDS
T08155
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120460101 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120460101 (prpf38a)
Spliceosome [BR:
pprm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120460101 (prpf38a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
120460101
NCBI-ProteinID:
XP_039503671
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEEEDDEEEKPERVQTPEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRDRDRHRKSKSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSP
ESRSKKSHKRSRREKE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagaacggtaaaagatgccaatagtatacatggaacaaatcctcagtatctt
gtcgagaagattatacggacacgcatatatgagtctaagtactggaaagaggaatgcttt
ggacttacagctgagcttgtggtggacaaagcaatggagctaaagtttgttggtggtgta
tatggaggaaacatcaagcctactccattcttatgtctgacattaaagatgctgcagatt
cagcctgaaaaggacatcattgtggaattcatcaagaatgaggacttcaagtatgtccgt
ttgcttggagcgatgtatatgcgcctgactggaacttctgtggattgctacaagtattta
gaaccattatacaatgactacagaaaaatcaaaagccagaatagaaatggagagtttgag
ttgatgcatgtcgatgagttcatagatgagcttcttcatgcagagcggatgtgcgacatc
atccttccaagacttcagaagagacaggttttggaggaagctgagctactggatactcgt
attagtgccctggaagaagacctggatgaggttgagaccagtgaagaggaggatgatgaa
gaagagaagcctgagagagtgcagacaccagagcctcacagaagaagttacagagatatg
gatcggccacgcaggtctccatctccacgctacagacgcagccgctcacccagaagacgg
agcagatcacctaaaagacgaagcccatcacccagacgtgaccgggaccgggaccgccac
cgtaaaagcaaaagcaaaagtccccgtagacaccgcagcagatccagggacagaaggcat
cgctccaaatctccaggtcaccacagaagtcaccggcatcgcagtcactccaagtcccca
gaaagtcggtcgaagaagagtcacaagagaagtcggagagaaaaagagtga
DBGET
integrated database retrieval system
