Pimephales promelas (fathead minnow): 120460128
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Entry
120460128 CDS
T08155
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120460128 (chd1l)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120460128 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
SLFN-g3_helicase
AAA_14
Motif
Other DBs
NCBI-GeneID:
120460128
NCBI-ProteinID:
XP_039503709
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MSIFLQAVSRNIPEKDKSELTESDLKKWGLGAINLRSYQLDGVRWLSQCMEIQEGCILGD
EMGLGKTCQTISLLAYARGCLKMNGPFLVLCPLSVLENWRQELERFCPSLSVLYYTGDKE
RRAELQEELKNGKNFHVLLTTYEMCLKDARFLKSWKWKILVVDEAHRLKNQESLLHQTLK
QFTVSFRVLLTGTPIQNNLQEVYSLLTFIQPSLFLPEDVEDFVRAYTDVQTEPALADELH
RVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILTRDLDAFRTDQSSKTRL
LNILMQLRKCVDHPYLFDGVEPEPFQMGEHLVEASGKLSLLDTMLAYLQEGGHRVLLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTNQDVFIFLLSTKAGGVGMNL
TAADTVIFVDSDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTVEEIIYSRAVSKLRLT
DTVIEGGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSIQDVDLRLILGQSRDGQW
LTDEEHVKLNESDEEENEDMEGQNHMYYFEGKDYSKDPSTEDEKTFELLLEKQLADLGDA
GKEGRALRNKAGVSLTGALIDLGRKRRPLTESELEQRRQKRQEGAAKRAKLQEERKKQQE
ELNYRKKMAWWDSCGYRSLCLPSVDSEGEEMESDEDDDVSWSSTDSEHRAIRYVLGDVTR
PQTDREDAIIVHCVDDSGYWGRGGLFTALELRSDEPRKQYELAGDMKDLELGNVLLFPID
DKQSRLSGRDYLALIVAQQRDKANKLSGIRLTALDEGLKKIYRDAKQKKASVHLPRIGHS
TKGFNWYGTERLIRKHLATKGISTSIYYYRRAASHSSTDSSTTCTATPSTSDPAGSAAGS
PLSSSPLGNNKTKISTMSHDSQDTPGLADFMRGVHVYFYNMAATEKKKLARYLITYDGDE
EDLMSSHVTHIIGEVESPVHAKELRDLLHQYPQALLVKKKWLESCFANQRKVSVSTYEIR
LS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatttcttcaagctgtcagtcgcaacataccagaaaaggacaagtcggaacta
acagagagtgacttgaaaaaatggggactaggagctattaatctgaggtcttatcagttg
gatggagttaggtggctgtcacagtgcatggagatccaggagggctgcatccttggtgat
gagatgggtctgggcaagacttgtcagaccatctctttgctggcatatgctcgtggatgt
cttaagatgaacggaccattccttgtgctttgtcccttatccgttttggagaactggaga
caagagttggaacgtttctgtcccagtctttctgtgctctattacactggggataaagag
agacgggcagagctccaggaagagctcaaaaatggcaaaaacttccatgttcttctcacc
acctatgagatgtgcctcaaggatgccagattcctgaaaagctggaaatggaagatttta
gttgtagatgaggctcacaggctgaagaaccaggaatcattgctgcaccaaaccctcaaa
cagtttacagtgagttttcgagtgctgttgacaggcactcccattcagaataacttgcaa
gaagtctattccctcctcaccttcatccagcccagtctgtttctccctgaagatgttgag
gactttgttagggcctatacagacgtacagactgaacctgcccttgctgatgagcttcat
cgagtgctccagccttttttactacgcagagttaaagcagaggtggcagctgaactgccc
aagaagacagaacttgttgtttttcatgggctgtctgctcttcagaagagatactataaa
gccattctgacgagagacctagatgccttcaggacagatcaaagttctaagacacgactt
ctgaacattttgatgcagctcaggaaatgtgtggaccatccttacttgtttgatggtgtg
gaaccagaaccgtttcagatgggggagcatttagtggaggccagtgggaagctctctttg
ttggacacaatgctggcgtatcttcaggaggggggccatcgtgttcttctgttctctcaa
atgaccaggatgctggatattctgcaagattacttggagtacagaggttacagttatgaa
cgtctggatggttcagtccggggagaggaacgtaacctagctattaaaaacttcagcacc
aatcaagatgtttttatattcctcctcagcactaaagctggaggggtaggaatgaaccta
acagcagcagatactgtgatatttgtggacagtgatttcaacccacagaatgacctacag
gcagcagccagagcccacaggattggccaaacaaggcctgttaaagtgatccggctcctc
gggagagacactgtagaagagatcatctattcccgtgctgtgtctaaactacgcctcaca
gacacggtgattgaggggggacgtttttctctgctggaccaggctcaatccgcagcttct
ggccttcagttgagtgagatcctgaagtttggtgtggataaactgctgtcgtcagaggag
agctctattcaagatgtggacctcaggctgatcctagggcagtctcgagatgggcaatgg
ctaacggatgaagagcatgtcaagcttaatgagagtgatgaagaggaaaatgaggacatg
gagggtcaaaaccacatgtactactttgaggggaaggactactctaaagaccccagtaca
gaggatgagaagacctttgaactgttacttgagaagcagttagctgatctaggggatgct
gggaaggaaggccgcgcacttcgtaacaaagctggggtgtccctgactggagccttgatt
gacctagggcggaagaggagacctcttacagaatcagagttagaacagagacgtcagaag
agacaagaaggtgctgcaaagagggcaaagctacaggaggaaaggaagaaacaacaggaa
gaactcaattacaggaagaagatggcatggtgggactcatgtggctacagatcgctgtgc
ttgccaagtgttgacagtgagggtgaggaaatggagtctgatgaagatgatgatgtcagc
tggagctccactgattcagaacacagagccattcgctatgtgctgggtgatgtaactcgt
cctcagaccgatcgagaagatgccatcattgtgcactgtgttgatgactctggatactgg
ggcagaggaggattgttcaccgcactggagctcagatcagatgagccgaggaaacagtat
gagttggctggtgacatgaaagacttagaacttgggaatgttctgctttttcctattgat
gataaacagtcaaggctcagtggaagagactatctggcactcatagttgcccagcagagg
gataaagccaacaagttgtcaggcattcggctcactgccttggatgagggcctcaagaag
atatacagagatgccaaacaaaagaaggcaagtgtccatctgcctcggattggtcactcc
actaaaggcttcaattggtacggtacagaaagactcattcgtaagcatctggccaccaaa
ggcatctccacatcgatatactattatagacgagccgcttcacactcttctacagattct
tccaccacatgcacagctactccatcaacctcagaccctgcaggatcagcagcaggttcc
ccactctcctccagtcctcttggcaataacaaaacaaaaatctccactatgtcacatgat
agtcaggacacacctgggttggctgacttcatgagaggtgttcatgtctacttctacaac
atggctgctacagaaaagaagaagctcgcccgctaccttatcacatatgatggtgatgaa
gaggatctcatgagctcacacgtcactcatatcataggagaggtagaaagtcctgtccat
gcaaaggaactgcgagatctattgcatcagtaccctcaggctctccttgtaaagaaaaag
tggctggaatcctgctttgctaaccaaaggaaagtcagtgtgtctacatatgaaattagg
ttaagttga
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integrated database retrieval system
