Pimephales promelas (fathead minnow): 120460232
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Entry
120460232 CDS
T08155
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120460232 (usb1)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
120460232 (usb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
120460232
NCBI-ProteinID:
XP_039503837
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All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MIVNYSSSSSEDETENSSKNDSSPSRKRGKLDNESSTSEPLDHGSVKSKAGKSALLKPRL
PLPESVREMFGESEEKWTDERDEHGGRIRSFQHERGNWATYMFFPYDPEEAFLEVLNEMM
LVAAAHGIPLALSEEFHLSLSKTVVLRHHWIQPFIQSIRTGVTHFQKFFCLADKLMVYSN
AEKTRTFLGLEVSTGKTQLLELIKILDQTMKEFNLSTFYKDPSFHISLAWCVGDHTESLK
KACLSELQSLIDAHEDGPFHIRLNCTELRCKTGNKVFLFSLQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaactacagtagtagcagttctgaagatgaaactgaaaactcttcaaaaaat
gattcctcaccttcaaggaaaagaggaaaacttgacaatgaaagcagcaccagtgaacct
ttggatcatggatctgttaaaagcaaagcaggcaaatcagccctcctgaaacctcgcctg
cctcttcccgagagtgtaagggagatgttcggagaatccgaagaaaagtggaccgatgaa
agggatgagcatggagggcgaattcggtccttccagcatgagcggggcaactgggctaca
tacatgttctttccttatgatcctgaggaggcctttctggaggtgctaaatgaaatgatg
ctggttgcggcagctcatggcatccctctggccctatctgaagagtttcacctcagtctc
tcaaagacagtggttctgcgccatcactggattcaaccgttcatccagtccattcggact
ggtgtgacacattttcagaagtttttctgcttggctgataaactgatggtgtattctaat
gctgaaaagactaggacattccttggtttggaagtctcaactggaaaaactcagttgctt
gagctcatcaaaatactggatcaaaccatgaaagaattcaacctcagcaccttttataag
gatccttctttccacataagccttgcttggtgtgtgggtgaccacacagaaagcctaaaa
aaggcatgtttatcagaattgcagagtctcattgacgctcatgaagatgggccttttcac
atacggctcaactgcacagagcttcgctgcaaaacgggaaataaagtctttcttttctcc
ctccaatga
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