Pimephales promelas (fathead minnow): 120460251
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Entry
120460251 CDS
T08155
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120460251
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Other basic domains
RF-X
120460251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
120460251
NCBI-ProteinID:
XP_039503858
LinkDB
All DBs
Position
Unknown
AA seq
1560 aa
AA seq
DB search
MKLTVMADDQQQQPGVPGVPGPSLQSLEATALQYNKIKNSICKSVQSKVESILQDVEKFT
DIEKLYLYLKLPSGPSSGNDKRTENQRGSASPAICDQNSMSSSRTQQTYAFNWIRNHLEE
HPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSG
LRKKAFVHMPSLPNLDIHKSGDGCELLESAGQSPSAEDEMRSAACGLVCEWAQKVLSRQF
DSVEELARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTSAFVPTGEANSFLPQVKTLPSP
SVDAKQQLQRKIQKKQQEQKLTSPLPTDAQVRRAEAGTPVPGSSLTSGSPALLSPQPTIG
IVVAAVQSPITVQRSRQLMTSPSPVGAAEGKVVPVNFQVVTQSLKQSPKTPQNISASPVG
DRLARHRYAQILPKPSATSAIALRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAISLAP
NSSSNSSTPTPLRPASAGISSTASQEEFNQTQQAHNGASAVSLQSSGFGKPGRPSTTPTP
LASTSTNEVKVTFEAVNDSNSAISVDKQSTASGASTGQKNERATKYRASSEPSLLIKASP
VPERVIRAKSDSSTPSSTIMEALAPSSNNNSNDQPESTLYLTVTSQNVDAELSSICAVTT
ASTSSKDAGLCLKSPRKRSASVLETHTIPVKRVFISQQPLDVSSSARPGLVISAKKIQRP
GTPARPESAPCKVTLKHSSSFPTQILALSDTPIGISRTVNPRTENEVADISLNETASGNS
TALLQQIPTHHQISSVVSQEVSAVSELKSSLQDFSQQMQAEHKQNAANPLPLMATETSSQ
LSIQQDIVDFAGAQASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLSCVDISL
QGQATVGQGTILSPHQTSTQFYHSSHSSATPVHTPTPTPTPTPTPTPTPTSEMLPGGNSM
TRESPCSRMATVTPVDSILGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGY
HDGSVVSSSPVKPMQRPMATHPDKAKLEWITNRYNSTAGSPVISTNSTIAILPSYQDLVE
DHFRKPHAFAIPGQSLQSQSRHQDGNLGRLTAVSPVQQGQQTTLSSRQESFAVPAPLDNK
GAGSTSASGTFRCRSVSPAVRQRNLSGTTAQTVTTPRSVVSPFNCPLTSEVLNILANNQS
VVSASTLAQRSQSVPLNIMMQSELLPVSHQAQQSNSAKITTVLLSKMDTDGDDAVRGLGV
NNLPSNYTARMNLTQILETTQGFPGGPSPQNQQLPLDSSPSPFDFQKTGYLISTGEEQVL
FSSGDSQAQSGSGLQQPEEQLELQEPQLELQDQHLQLQNQQLQLPDQQLQLQDQQLQLQD
QQLQLQDQQMQLQDQQLQLQDQQLQLQDQQLQLSDQQQLQDDPDLTRQHLLPQTSQQVVD
HGHQEQLDFNTTVKDLLGEDSLNPSSQLVGQVASELSAVASDFSSDIRLTSDLSSSINDL
NTLDPNLLFDPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtgatggctgatgatcaacaacaacagcccggtgttcccggtgttccc
ggaccgtccctgcagagcctcgaggccacggcactgcagtacaacaagatcaagaactcc
atttgcaaatctgtacaatcaaaagtggagagtattttgcaagatgtcgagaagtttaca
gatatcgaaaagctctacctctaccttaagttgccttctggtcccagtagtggcaatgac
aaaagaactgaaaatcagaggggctctgcaagtcctgcaatatgtgaccagaattcaatg
tcgtccagtcggactcaacaaacatacgcgttcaactggatccgaaatcacttggaagag
catccggaaacctcattgccaaaacaagaggtgtacgacgagtacaagagttattgcgac
aatctgggataccatcctttaagcgcagctgatttcggaaagatcatgaagaatgttttt
ccgaacatgaaggcacgtcgtttgggcatgcgggggaagtcaaagtactgctatagtggt
ctgaggaaaaaagcatttgtgcacatgccgtcgctcccaaacctggacatacacaaatca
ggagatgggtgcgagctgttggagtcggccggacagtctcccagtgccgaggacgagatg
cgatctgctgcctgtggtctggtctgcgaatgggcccagaaggttctgagtcgccagttt
gacagtgtggaagaactggcacgctttcttctcaacagtcactatataggcactaagtcc
atggcagctcttactgttatgactgggaccccaacaggtatgaaaacccctacgtctgcg
tttgtgccaaccggtgaagccaactcattccttccccaagtgaagaccctcccgtcacct
tctgtagacgccaaacagcagcttcaacgtaagatccagaagaagcagcaggagcagaag
ctcacctctcccttgcccaccgatgcccaggtgagaagggccgaggcgggcacacctgtc
ccggggtccagcctgacctctggaagtcctgcattgctgtcccctcaaccaaccattggc
attgtggttgctgctgttcaaagtcctatcacagttcagagaagcaggcaattaatgacc
tccccaagtcctgttggggcagcagagggaaaagttgtaccggttaacttccaggtcgtg
acacaatctcttaagcagtctccaaaaacaccccagaatatctctgccagcccagttggt
gaccggttggccagacaccgatatgcccagatcttacctaaaccttccgccacaagcgcc
attgcacttcgctcacccccaacgctcttaatcaccaacagccccatcaagacagtgatg
cccacacctcatgttagctctgtaaatgtggtcaagatgactgcgatatcgctagcgccc
aacagtagcagtaatagtagtactcctaccccattgcgacctgcatcggcaggcatcagt
agcacagcttcccaggaagaatttaaccaaacccagcaagctcataacggggcgtctgcc
gtctctcttcagtcatctggatttgggaaacctggacgtccttctacaaccccaaccccg
ttagcgtccaccagtaccaatgaggtgaaagtgacatttgaagctgtgaatgacagtaac
tcagctatttctgttgataaacaaagcactgcgtcaggggcaagtacaggacaaaagaac
gaaagagccactaaataccgggcttccagtgaaccctctctgcttattaaggcatcccct
gtgcctgagagagttataagggccaagagtgactcttcaaccccttcaagtacaatcatg
gaggctcttgccccaagcagcaataacaacagcaatgatcaaccagaaagtactttgtat
ttaactgttactagccagaatgtagatgctgaattgtcatccatttgtgcggtgacaact
gcaagcacttcttctaaagatgctggtctctgtctaaaaagccctcgaaaacgctctgca
tctgttttggaaacccacacaatcccagttaaaagagtattcatttcccagcaacctttg
gatgttagcagcagtgccaggcctggtcttgtaatatcagctaagaagatccagagacct
ggcaccccagcaagaccagagagtgctccatgcaaagttacgctaaaacacagtagctcc
tttccaactcaaatcttggctctctccgacactcccattggaatctctcgtactgtaaat
cctcgaaccgagaatgaagttgctgatatcagcctgaatgaaacagcttctggtaatagc
acagctttattgcagcaaatcccaactcaccaccaaatcagcagtgttgtttctcaggag
gtatccgctgtaagtgagctcaagagctcgctgcaagacttctcgcaacagatgcaagca
gaacacaagcagaacgctgctaatccgttaccattgatggcaactgagacctccagtcag
ctctctattcagcaggacattgttgattttgcaggtgcccaagctagcattgactatttc
cccttcaatgatgatgatatgacccaggacagtattgtagaagagctcgtacagatggag
gagcaaatgaagctgaatagcagcttgcaatcctacctaagttgtgtggatatatcccta
caaggtcaagccacagttggacaaggaacaatcctgtcgccccatcagacaagtacgcag
ttctatcattcctcccatagtagtgcaacgccagtgcacacgccaactccgacgcctacg
ccaacaccaacgcctactccaactcctacctccgagatgctaccaggggggaatagcatg
accagggaaagcccttgttcccgaatggcaactgttaccccagtggatagcatcttaggt
gggcgccatacacccatcagcactccactgtcaaactgcagtagcagtgttcctccaagt
cccattgaatgccgcaatccctttgcattcactcccattaactccagtataactggttat
catgatggtagtgttgtgtccagcagtccagtgaagcccatgcaaaggcctatggccacc
cacccagataaagccaagctggagtggatcaccaaccggtacaacagcaccgcaggctct
cctgttatctcaaccaactccaccattgctatcctccccagttaccaggatctggtcgag
gaccatttccgtaaaccacacgcctttgccatccctggccaatctctccagtctcagtca
aggcatcaggatggaaacttagggaggttaacagccgtttctccagttcaacaaggacag
caaaccacccttagtagcaggcaagaaagtttcgccgtccctgctccgttggacaataaa
ggggccggaagcacatctgcatctggaaccttccggtgtcgtagcgttagcccggcagtt
cgccagcgtaacctcagtggcaccactgcacaaacagtcaccacccctcggtctgttgtt
tctccctttaattgccccctgacatctgaggtccttaatattctggccaacaaccagtcg
gtggtcagtgccagcaccttggcccaaaggagccaatcagtgccactaaacatcatgatg
cagtctgagctgctgcctgtcagtcaccaggcgcagcaaagcaatagcgctaagatcaca
accgtgctcctcagcaagatggacacggatggagacgatgcagtgcgaggacttggtgta
aataacctgccatccaattacaccgcacggatgaacttaacccaaatcttggagacgaca
cagggcttccccggaggccccagtcctcagaaccagcagctgcctctggattcaagccct
tcgccatttgacttccagaagacgggttacctcataagcacgggagaggaacaagtcctc
ttctccagtggcgacagtcaagcacaatcaggctctggactgcaacaaccggaggagcag
cttgagctccaagaaccgcaattggagctgcaagatcaacatctacagctccagaatcaa
cagctgcaacttccagatcagcaattacaactccaagaccaacagttgcagctccaggac
caacagttgcaactccaggaccaacagatgcaacttcaagaccaacaattgcaactccag
gaccaacagttgcaactccaggaccaacagttgcagttgtcagaccaacaacagttacaa
gatgatccagatctcacccggcagcacttgttgccccaaacctctcagcaggtcgtggat
cacgggcaccaagagcaactggacttcaacactaccgtcaaggatctcttaggggaggac
agcctcaaccctagttcacaactcgtcggacaagtggcgtcagaacttagtgcggtcgct
tctgacttttccagcgatatccggttgacttctgacctttctagtagcattaatgacctg
aacactttggaccccaacttgctgtttgaccccagtcaacagcaggaccaatatgaagat
gccacactggaagaactgaagaacgatcctctgtttcagcagatttgcagcgatactgtg
aattctgctggttttgattggctggagaataaagaccagccaaccgtggaaatgttggga
taa
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integrated database retrieval system
